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Mercury in PDB 1ej0: Ftsj Rna Methyltransferase Complexed with S-Adenosylmethionine, Mercury Derivative

Protein crystallography data

The structure of Ftsj Rna Methyltransferase Complexed with S-Adenosylmethionine, Mercury Derivative, PDB code: 1ej0 was solved by H.Bugl, E.B.Fauman, B.L.Staker, F.Zheng, S.R.Kushner, M.A.Saper, J.C.A.Bardwell, U.Jakob, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 17.13 / 1.50
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 36.579, 65.872, 72.829, 90.00, 90.00, 90.00
R / Rfree (%) 19.8 / 23.2

Mercury Binding Sites:

The binding sites of Mercury atom in the Ftsj Rna Methyltransferase Complexed with S-Adenosylmethionine, Mercury Derivative (pdb code 1ej0). This binding sites where shown within 5.0 Angstroms radius around Mercury atom.
In total 2 binding sites of Mercury where determined in the Ftsj Rna Methyltransferase Complexed with S-Adenosylmethionine, Mercury Derivative, PDB code: 1ej0:
Jump to Mercury binding site number: 1; 2;

Mercury binding site 1 out of 2 in 1ej0

Go back to Mercury Binding Sites List in 1ej0
Mercury binding site 1 out of 2 in the Ftsj Rna Methyltransferase Complexed with S-Adenosylmethionine, Mercury Derivative


Mono view


Stereo pair view

A full contact list of Mercury with other atoms in the Hg binding site number 1 of Ftsj Rna Methyltransferase Complexed with S-Adenosylmethionine, Mercury Derivative within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Hg901

b:18.0
occ:0.86
SG A:CYS151 2.6 15.5 1.0
CB A:CYS151 3.3 10.5 1.0
C A:CYS151 3.3 11.0 1.0
N A:ARG152 3.4 11.0 1.0
O A:CYS151 3.5 12.7 1.0
CZ A:PHE182 3.6 8.4 1.0
CA A:ARG152 3.8 10.4 1.0
NH1 A:ARG207 3.8 28.1 1.0
CE1 A:PHE182 3.8 9.1 1.0
CA A:CYS151 3.9 11.6 1.0
CD2 A:LEU155 4.1 10.7 1.0
CZ A:ARG207 4.2 28.2 1.0
CG A:ARG207 4.2 13.6 1.0
CD1 A:LEU148 4.3 14.2 1.0
CB A:LEU155 4.4 9.5 1.0
CG A:ARG152 4.5 14.3 1.0
NE A:ARG207 4.5 25.4 1.0
CD A:ARG207 4.6 18.5 1.0
O A:LEU148 4.6 13.5 1.0
CB A:ARG152 4.7 13.9 1.0
CE2 A:PHE182 4.7 13.3 1.0
NH2 A:ARG207 4.7 26.4 1.0
CD1 A:LEU181 4.8 15.4 1.0
C A:ARG152 4.9 15.3 1.0
CG A:LEU155 4.9 10.3 1.0

Mercury binding site 2 out of 2 in 1ej0

Go back to Mercury Binding Sites List in 1ej0
Mercury binding site 2 out of 2 in the Ftsj Rna Methyltransferase Complexed with S-Adenosylmethionine, Mercury Derivative


Mono view


Stereo pair view

A full contact list of Mercury with other atoms in the Hg binding site number 2 of Ftsj Rna Methyltransferase Complexed with S-Adenosylmethionine, Mercury Derivative within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Hg912

b:19.8
occ:0.85
SG A:CYS82 2.2 14.1 1.0
O A:LEU96 2.6 19.9 1.0
N A:GLY98 2.8 17.8 1.0
O A:GLY98 2.9 16.9 1.0
CB A:CYS82 3.3 11.4 1.0
CA A:GLY98 3.4 17.8 1.0
C A:GLY98 3.4 18.1 1.0
C A:LEU96 3.5 17.4 1.0
C A:GLN97 3.5 16.3 1.0
O A:ASP83 3.6 15.2 1.0
CG1 A:VAL105 3.6 20.8 1.0
N A:ASP83 3.7 10.7 1.0
CA A:CYS82 3.8 9.8 1.0
CA A:GLN97 3.8 17.7 1.0
N A:GLN97 4.0 16.0 1.0
C A:CYS82 4.1 9.3 1.0
C A:ASP83 4.2 12.5 1.0
CB A:LEU96 4.3 18.8 1.0
O A:GLN97 4.4 19.1 1.0
CA A:ASP83 4.5 10.7 1.0
CA A:LEU96 4.5 17.5 1.0
N A:ASP99 4.5 15.7 1.0
CB A:VAL105 4.9 20.2 1.0
CG2 A:VAL105 5.0 18.8 1.0
CD2 A:LEU109 5.0 18.3 1.0

Reference:

H.Bugl, E.B.Fauman, B.L.Staker, F.Zheng, S.R.Kushner, M.A.Saper, J.C.Bardwell, U.Jakob. Rna Methylation Under Heat Shock Control. Mol.Cell V. 6 349 2000.
ISSN: ISSN 1097-2765
PubMed: 10983982
DOI: 10.1016/S1097-2765(00)00035-6
Page generated: Wed Oct 28 18:39:11 2020

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