Chemical elements
  Mercury
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    PDB 12ca-1dr4
    PDB 1dr5-1ht3
      1dr5
      1dr6
      1dr7
      1dvw
      1e7z
      1edh
      1ej0
      1ek8
      1ems
      1euw
      1ezj
      1f2w
      1f88
      1fe4
      1fl9
      1fmj
      1fnl
      1fo8
      1fp8
      1fql
      1fqm
      1g0e
      1g0f
      1g1d
      1g3z
      1g45
      1g46
      1g48
      1g4j
      1g4o
      1g52
      1g53
      1g54
      1g5b
      1g6h
      1g8k
      1g93
      1g9u
      1g9x
      1gcb
      1gon
      1gze
      1hca
      1hdk
      1hea
      1heb
      1hed
      1hj1
      1hkq
      1ht3
    PDB 1hzx-1mms
    PDB 1moo-1rhy
    PDB 1rnr-1zfk
    PDB 1zfq-2geh
    PDB 2gv9-2wcd
    PDB 2wiu-3k34
    PDB 3k4o-9ca2

Mercury in the structure of Ftsj Rna Methyltransferase Complexed With S- Adenosylmethionine, Mercury Derivative (pdb 1ej0)






The binding sites of Mercury atom in the structure of Ftsj Rna Methyltransferase Complexed With S- Adenosylmethionine, Mercury Derivative (pdb code 1ej0). This binding sites where shown with 5.0 Angstroms radius around Mercury atom.
The 1ej0 structure was solved by H.BUGL, E.B.FAUMAN, B.L.STAKER, F.ZHENG, S.R.KUSHNER, M.A.SAPER, J.C.A.BARDWELL, U.JAKOB, with X-Ray Crystallography technique, brief refinement statistics is given in the table below:
Resolution (A)17.1-1.5
Space groupP212121
a (A)36.579
b (A)65.872
c (A)72.829
alpha (°)90.00
beta (°)90.00
gamma (°)90.00
Rfactor (%)19.8
Rfree (%)23.2


Mercury Binding Sites:

Mercury binding site 1 out of 2 in 1ej0


Mercury binding site 1 out of 2 in 1ej0
Click to enlarge
stereopicture of Mercury binding site 1 out of 2 in 1ej0
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Mercury in the PDB 1ej0. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Mercury atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Leu148, A: Cys151, A: Arg152, A: Leu155, A: Leu181, A: Phe182, A: Arg207,

conact list:


AtomAtomDistance (A)
HgO A:Leu1484.64
HgCD1 A:Leu1484.29
HgO A:Cys1513.51
HgCB A:Cys1513.31
HgSG A:Cys1512.56
HgC A:Cys1513.33
HgCA A:Cys1513.93
HgN A:Arg1523.44
HgCB A:Arg1524.68
HgC A:Arg1524.92
HgCG A:Arg1524.46
HgCA A:Arg1523.75
HgCB A:Leu1554.39
HgCD2 A:Leu1554.10
HgCG A:Leu1554.94
HgCD1 A:Leu1814.81
HgCE2 A:Phe1824.71
HgCZ A:Phe1823.60
HgCE1 A:Phe1823.82
HgCD A:Arg2074.57
HgCZ A:Arg2074.15
HgCG A:Arg2074.24
HgNE A:Arg2074.50
HgNH2 A:Arg2074.73
HgNH1 A:Arg2073.77

interactive model:


Mercury binding site 2 out of 2 in 1ej0


Mercury binding site 2 out of 2 in 1ej0
Click to enlarge
stereopicture of Mercury binding site 2 out of 2 in 1ej0
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 2 of Mercury in the PDB 1ej0. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Mercury atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Cys82, A: Asp83, A: Leu96, A: Gln97, A: Gly98, A: Asp99, A: Val105, A: Leu109,

conact list:


AtomAtomDistance (A)
HgCB A:Cys823.34
HgSG A:Cys822.19
HgC A:Cys824.07
HgCA A:Cys823.80
HgO A:Asp833.57
HgN A:Asp833.65
HgC A:Asp834.21
HgCA A:Asp834.51
HgO A:Leu962.62
HgCB A:Leu964.25
HgC A:Leu963.46
HgCA A:Leu964.51
HgO A:Gln974.44
HgN A:Gln973.98
HgC A:Gln973.54
HgCA A:Gln973.84
HgO A:Gly982.92
HgN A:Gly982.80
HgC A:Gly983.39
HgCA A:Gly983.39
HgN A:Asp994.51
HgCB A:Val1054.91
HgCG2 A:Val1054.95
HgCG1 A:Val1053.61
HgCD2 A:Leu1094.96

interactive model:




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