The binding sites of Mercury atom in the structure of Crystal Structure of the Ftsh Atpase Domain From Thermus Thermophilus (pdb code 1ixz). This binding sites where shown with 5.0 Angstroms radius around Mercury atom.
The 1ixz structure was solved by H.NIWA, D.TSUCHIYA, H.MAKYIO, M.YOSHIDA, K.MORIKAWA, with X-Ray Crystallography technique, brief refinement statistics is given in the table below:
| Resolution (A) | 12.0-2.2 | | Space group | P65 | | a (A) | 73.535 | | b (A) | 73.535 | | c (A) | 88.468 | | alpha (°) | 90.00 | | beta (°) | 90.00 | | gamma (°) | 120.00 | | Rfactor (%) | 19.6 | | Rfree (%) | 23.8 |
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Mercury binding site 1 out of 2 in 1ixz
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Click to enlarge | 
Click to enlarge | Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Mercury in the PDB 1ixz. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Mercury atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Ile334, A: His338, A: Hoh465, A: Hoh475, | conact list:
| Atom | Atom | Distance (A) | | Hg | CB A:Ile334 | 5.00 | | Hg | CG2 A:Ile334 | 4.07 | | Hg | CG1 A:Ile334 | 4.90 | | Hg | NE2 A:His338 | 2.72 | | Hg | ND1 A:His338 | 4.74 | | Hg | CD2 A:His338 | 3.64 | | Hg | CE1 A:His338 | 3.63 | | Hg | CG A:His338 | 4.77 | | Hg | O A:Hoh465 | 2.58 | | Hg | O A:Hoh475 | 3.90 |
| interactive model:
| Mercury binding site 2 out of 2 in 1ixz
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Click to enlarge | 
Click to enlarge | Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 2 of Mercury in the PDB 1ixz. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Mercury atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Ala244, A: Lys245, A: His247, A: Ala248, A: Pro249, A: Cys250, A: Ala294, A: Ile295, A: Hoh495, | conact list:
| Atom | Atom | Distance (A) | | Hg | O A:Ala244 | 2.78 | | Hg | C A:Ala244 | 3.67 | | Hg | CB A:Ala244 | 4.40 | | Hg | CA A:Ala244 | 4.43 | | Hg | N A:Lys245 | 4.49 | | Hg | CA A:Lys245 | 4.59 | | Hg | O A:His247 | 3.02 | | Hg | N A:His247 | 4.60 | | Hg | CB A:His247 | 4.68 | | Hg | C A:His247 | 3.61 | | Hg | CA A:His247 | 4.49 | | Hg | N A:Ala248 | 4.11 | | Hg | CB A:Ala248 | 4.91 | | Hg | CA A:Ala248 | 4.10 | | Hg | O A:Pro249 | 4.67 | | Hg | C A:Pro249 | 3.98 | | Hg | CA A:Pro249 | 4.34 | | Hg | O A:Cys250 | 4.44 | | Hg | N A:Cys250 | 3.46 | | Hg | CB A:Cys250 | 3.37 | | Hg | SG A:Cys250 | 2.57 | | Hg | C A:Cys250 | 4.41 | | Hg | CA A:Cys250 | 3.90 | | Hg | O A:Ala294 | 3.59 | | Hg | C A:Ala294 | 4.32 | | Hg | N A:Ile295 | 4.64 | | Hg | CB A:Ile295 | 3.95 | | Hg | CD1 A:Ile295 | 4.63 | | Hg | CG1 A:Ile295 | 4.15 | | Hg | CA A:Ile295 | 4.26 | | Hg | O A:Hoh495 | 2.42 |
| interactive model:
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