Atomistry » Mercury » PDB 1is9-1obh » 1lug
Atomistry »
  Mercury »
    PDB 1is9-1obh »
      1lug »

Mercury in PDB 1lug: Full Matrix Error Analysis of Carbonic Anhydrase

Enzymatic activity of Full Matrix Error Analysis of Carbonic Anhydrase

All present enzymatic activity of Full Matrix Error Analysis of Carbonic Anhydrase:
4.2.1.1;

Protein crystallography data

The structure of Full Matrix Error Analysis of Carbonic Anhydrase, PDB code: 1lug was solved by E.A.Merritt, I.Le Trong, C.A.Behnke, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 15.00 / 0.95
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 42.064, 41.311, 71.868, 90.00, 104.23, 90.00
R / Rfree (%) 11.9 / 14.1

Other elements in 1lug:

The structure of Full Matrix Error Analysis of Carbonic Anhydrase also contains other interesting chemical elements:

Zinc (Zn) 1 atom

Mercury Binding Sites:

The binding sites of Mercury atom in the Full Matrix Error Analysis of Carbonic Anhydrase (pdb code 1lug). This binding sites where shown within 5.0 Angstroms radius around Mercury atom.
In total 3 binding sites of Mercury where determined in the Full Matrix Error Analysis of Carbonic Anhydrase, PDB code: 1lug:
Jump to Mercury binding site number: 1; 2; 3;

Mercury binding site 1 out of 3 in 1lug

Go back to Mercury Binding Sites List in 1lug
Mercury binding site 1 out of 3 in the Full Matrix Error Analysis of Carbonic Anhydrase


Mono view


Stereo pair view

A full contact list of Mercury with other atoms in the Hg binding site number 1 of Full Matrix Error Analysis of Carbonic Anhydrase within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Hg1005

b:13.7
occ:0.14
C7 A:SUA1002 2.3 12.6 0.5
S2 A:SUA1002 2.7 31.1 0.5
N2 A:SUA1002 3.5 19.7 1.0
C7 A:SUA1002 3.6 21.3 0.5
CE1 A:PHE130 3.6 13.8 1.0
CZ A:PHE130 4.1 11.7 1.0
CD A:PRO201 4.3 9.4 1.0
CG A:PRO201 4.4 10.6 1.0
CD1 A:LEU197 4.5 8.9 1.0
O3 A:SUA1002 4.7 29.2 0.5
C6 A:SUA1002 4.7 14.1 1.0
CD1 A:PHE130 4.8 11.9 1.0
CG2 A:VAL134 4.9 11.9 1.0

Mercury binding site 2 out of 3 in 1lug

Go back to Mercury Binding Sites List in 1lug
Mercury binding site 2 out of 3 in the Full Matrix Error Analysis of Carbonic Anhydrase


Mono view


Stereo pair view

A full contact list of Mercury with other atoms in the Hg binding site number 2 of Full Matrix Error Analysis of Carbonic Anhydrase within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Hg1205

b:8.1
occ:0.60
HG A:MBO1205 0.0 8.1 0.6
HG A:MBO1205 1.3 8.8 0.4
CE1 A:MBO1205 1.4 7.6 0.4
CE6 A:MBO1205 1.9 9.7 0.4
CE1 A:MBO1205 2.1 9.6 0.6
SG A:CYS205 2.3 7.3 0.6
CE2 A:MBO1205 2.9 11.8 0.4
O A:GLN136 2.9 7.6 1.0
O A:HOH1905 3.0 12.4 0.6
O A:GLU204 3.0 8.3 1.0
CE6 A:MBO1205 3.1 10.7 0.6
CE2 A:MBO1205 3.1 12.1 0.6
CB A:CYS205 3.3 7.4 0.6
SG A:CYS205 3.3 8.1 0.4
C A:GLN136 3.3 7.4 1.0
CE5 A:MBO1205 3.3 13.2 0.4
C A:GLU204 3.4 6.6 1.0
CA A:CYS205 3.5 5.9 1.0
N A:CYS205 3.7 6.0 1.0
N A:GLN136 3.7 7.9 1.0
O A:HOH2246 3.8 16.6 1.0
CB A:CYS205 3.8 7.1 0.4
N A:PRO137 3.9 7.5 1.0
CE3 A:MBO1205 4.0 11.4 0.4
CA A:PRO137 4.0 8.2 1.0
CA A:GLN136 4.1 8.2 1.0
O A:VAL134 4.1 11.7 1.0
CE4 A:MBO1205 4.1 13.7 0.4
O A:HOH1905 4.2 15.1 0.4
N A:GLU204 4.2 6.7 1.0
C A:GLN135 4.2 9.4 1.0
CA A:GLU204 4.3 6.5 1.0
CE5 A:MBO1205 4.4 12.4 0.6
CE3 A:MBO1205 4.4 12.7 0.6
C A:VAL134 4.6 9.0 1.0
O A:GLN135 4.7 11.1 1.0
CA A:GLN135 4.7 11.3 1.0
CD A:PRO137 4.9 10.0 1.0
O A:HOH2298 4.9 31.2 1.0
C A:LEU203 4.9 5.9 1.0
C A:PRO137 4.9 7.5 1.0
CB A:GLU204 4.9 7.7 1.0
CE4 A:MBO1205 4.9 14.8 0.6
N A:GLN135 5.0 9.8 1.0
C A:CYS205 5.0 6.2 1.0

Mercury binding site 3 out of 3 in 1lug

Go back to Mercury Binding Sites List in 1lug
Mercury binding site 3 out of 3 in the Full Matrix Error Analysis of Carbonic Anhydrase


Mono view


Stereo pair view

A full contact list of Mercury with other atoms in the Hg binding site number 3 of Full Matrix Error Analysis of Carbonic Anhydrase within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Hg1205

b:8.8
occ:0.40
HG A:MBO1205 0.0 8.8 0.4
HG A:MBO1205 1.3 8.1 0.6
SG A:CYS205 1.3 7.3 0.6
CE1 A:MBO1205 1.9 7.6 0.4
SG A:CYS205 2.3 8.1 0.4
O A:HOH1905 2.5 12.4 0.6
CB A:CYS205 2.7 7.4 0.6
CE6 A:MBO1205 2.9 9.7 0.4
CE2 A:MBO1205 3.0 11.8 0.4
O A:VAL134 3.0 11.7 1.0
O A:GLN136 3.2 7.6 1.0
CB A:CYS205 3.2 7.1 0.4
CE1 A:MBO1205 3.3 9.6 0.6
CA A:CYS205 3.5 5.9 1.0
C A:VAL134 3.6 9.0 1.0
N A:GLN136 3.6 7.9 1.0
N A:CYS205 3.7 6.0 1.0
C A:GLU204 3.7 6.6 1.0
O A:GLU204 3.7 8.3 1.0
C A:GLN136 3.8 7.4 1.0
O A:HOH2246 3.9 16.6 1.0
CE2 A:MBO1205 4.1 12.1 0.6
C A:GLN135 4.1 9.4 1.0
N A:GLU204 4.1 6.7 1.0
CA A:VAL134 4.2 9.2 1.0
CB A:LEU203 4.2 7.8 1.0
N A:GLN135 4.2 9.8 1.0
CA A:GLN135 4.3 11.3 1.0
CE5 A:MBO1205 4.3 13.2 0.4
CE6 A:MBO1205 4.3 10.7 0.6
CE3 A:MBO1205 4.3 11.4 0.4
CA A:GLN136 4.3 8.2 1.0
C A:LEU203 4.5 5.9 1.0
CA A:GLU204 4.6 6.5 1.0
O A:ALA133 4.6 7.8 1.0
N A:PRO137 4.7 7.5 1.0
CE4 A:MBO1205 4.8 13.7 0.4
O A:GLN135 4.8 11.1 1.0
CB A:VAL134 4.9 10.5 1.0
CA A:LEU203 4.9 7.0 1.0
CA A:PRO137 4.9 8.2 1.0
C A:CYS205 4.9 6.2 1.0

Reference:

C.A.Behnke, I.Le Trong, J.W.Godden, E.A.Merritt, D.C.Teller, J.Bajorath, R.E.Stenkamp. Atomic Resolution Studies of Carbonic Anhydrase II. Acta Crystallogr.,Sect.D V. 66 616 2010.
ISSN: ISSN 0907-4449
PubMed: 20445237
DOI: 10.1107/S0907444910006554
Page generated: Sun Dec 13 19:03:51 2020

Last articles

Zn in 7VD8
Zn in 7V1R
Zn in 7V1Q
Zn in 7VPF
Zn in 7T85
Zn in 7T5F
Zn in 7NF9
Zn in 7M4M
Zn in 7M4O
Zn in 7M4N
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy