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Mercury in PDB 1wy0: Crystal Structure of Geranylgeranyl Pyrophosphate Synthetase From Pyrococcus Horikoshii OT3

Protein crystallography data

The structure of Crystal Structure of Geranylgeranyl Pyrophosphate Synthetase From Pyrococcus Horikoshii OT3, PDB code: 1wy0 was solved by M.Sugahara, N.Kunishima, Riken Structural Genomics/Proteomicsinitiative (Rsgi), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 14.90 / 2.20
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 63.353, 75.780, 80.863, 90.00, 90.00, 90.00
R / Rfree (%) 24.6 / 26.3

Other elements in 1wy0:

The structure of Crystal Structure of Geranylgeranyl Pyrophosphate Synthetase From Pyrococcus Horikoshii OT3 also contains other interesting chemical elements:

Bromine (Br) 1 atom

Mercury Binding Sites:

The binding sites of Mercury atom in the Crystal Structure of Geranylgeranyl Pyrophosphate Synthetase From Pyrococcus Horikoshii OT3 (pdb code 1wy0). This binding sites where shown within 5.0 Angstroms radius around Mercury atom.
In total only one binding site of Mercury was determined in the Crystal Structure of Geranylgeranyl Pyrophosphate Synthetase From Pyrococcus Horikoshii OT3, PDB code: 1wy0:

Mercury binding site 1 out of 1 in 1wy0

Go back to Mercury Binding Sites List in 1wy0
Mercury binding site 1 out of 1 in the Crystal Structure of Geranylgeranyl Pyrophosphate Synthetase From Pyrococcus Horikoshii OT3


Mono view


Stereo pair view

A full contact list of Mercury with other atoms in the Hg binding site number 1 of Crystal Structure of Geranylgeranyl Pyrophosphate Synthetase From Pyrococcus Horikoshii OT3 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Hg1001

b:52.8
occ:1.00
SG A:CYS150 2.7 36.7 1.0
OH A:TYR81 2.9 28.1 1.0
O A:HOH2010 3.4 31.3 1.0
CA A:CYS150 3.4 32.0 1.0
CB A:CYS150 3.5 33.1 1.0
N A:CYS150 3.8 32.1 1.0
CZ A:TYR81 3.9 30.2 1.0
C A:LEU149 4.3 33.0 1.0
CG A:LEU149 4.5 37.0 1.0
O A:LEU149 4.5 33.1 1.0
CE1 A:TYR81 4.6 28.2 1.0
CE2 A:TYR81 4.7 29.4 1.0
C A:CYS150 4.8 31.7 1.0
CB A:LEU149 5.0 33.5 1.0
O A:SER146 5.0 29.4 1.0

Reference:

M.Sugahara, N.Kunishima. Crystal Structure of Geranylgeranyl Pyrophosphate Synthetase From Pyrococcus Horikoshii OT3 To Be Published.
Page generated: Wed Oct 28 18:40:52 2020

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