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Mercury in PDB 3lhr: Crystal Structure of the Scan Domain From Human ZNF24

Protein crystallography data

The structure of Crystal Structure of the Scan Domain From Human ZNF24, PDB code: 3lhr was solved by B.F.Volkman, F.C.Peterson, C.A.Bingman, G.N.Phillips Jr., Center Foreukaryotic Structural Genomics (Cesg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 33.73 / 1.90
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 43.055, 50.029, 91.301, 90.00, 90.00, 90.00
R / Rfree (%) 18.2 / 24.3

Other elements in 3lhr:

The structure of Crystal Structure of the Scan Domain From Human ZNF24 also contains other interesting chemical elements:

Magnesium (Mg) 1 atom
Chlorine (Cl) 1 atom

Mercury Binding Sites:

The binding sites of Mercury atom in the Crystal Structure of the Scan Domain From Human ZNF24 (pdb code 3lhr). This binding sites where shown within 5.0 Angstroms radius around Mercury atom.
In total 2 binding sites of Mercury where determined in the Crystal Structure of the Scan Domain From Human ZNF24, PDB code: 3lhr:
Jump to Mercury binding site number: 1; 2;

Mercury binding site 1 out of 2 in 3lhr

Go back to Mercury Binding Sites List in 3lhr
Mercury binding site 1 out of 2 in the Crystal Structure of the Scan Domain From Human ZNF24


Mono view


Stereo pair view

A full contact list of Mercury with other atoms in the Hg binding site number 1 of Crystal Structure of the Scan Domain From Human ZNF24 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Hg96

b:30.9
occ:0.60
HG A:EMC96 0.0 30.9 0.6
C1 A:EMC96 2.4 32.3 0.6
SG A:CYS34 2.5 28.3 1.0
CB A:CYS34 2.9 23.2 1.0
C2 A:EMC96 3.4 19.5 0.6
O A:ARG31 3.4 22.5 1.0
CB B:LEU49 3.6 22.9 1.0
CG2 B:VAL53 3.6 18.7 1.0
N A:ARG35 3.7 22.1 1.0
CG A:ARG35 3.8 31.5 1.0
C A:CYS34 4.0 22.4 1.0
CA A:CYS34 4.1 22.9 1.0
CA A:ARG31 4.2 21.5 1.0
O B:LEU49 4.2 21.8 1.0
CD2 B:LEU49 4.2 29.0 1.0
C A:ARG31 4.2 22.3 1.0
CG B:LEU49 4.3 30.3 1.0
CA A:ARG35 4.3 25.4 1.0
C B:LEU49 4.4 22.0 1.0
CD1 B:LEU49 4.4 32.3 1.0
CA B:LEU49 4.4 23.7 1.0
O A:CYS34 4.6 23.6 1.0
NH1 A:ARG35 4.7 55.2 1.0
CB A:ARG35 4.7 26.9 1.0
CB A:ARG31 4.8 21.9 1.0
N A:CYS34 4.9 20.9 1.0
CD A:ARG35 5.0 41.7 1.0

Mercury binding site 2 out of 2 in 3lhr

Go back to Mercury Binding Sites List in 3lhr
Mercury binding site 2 out of 2 in the Crystal Structure of the Scan Domain From Human ZNF24


Mono view


Stereo pair view

A full contact list of Mercury with other atoms in the Hg binding site number 2 of Crystal Structure of the Scan Domain From Human ZNF24 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Hg97

b:33.9
occ:0.50
HG A:EMC97 0.0 33.9 0.5
C1 A:EMC97 2.4 26.1 0.5
SG B:CYS34 2.6 28.2 1.0
C2 A:EMC97 3.2 24.6 0.5
CB B:CYS34 3.3 22.6 1.0
CB A:LEU49 3.5 29.1 1.0
O B:ARG31 3.6 21.1 1.0
CG2 A:VAL53 3.7 16.1 1.0
N B:ARG35 3.7 19.5 1.0
CG B:ARG35 3.9 27.1 1.0
C B:CYS34 3.9 19.1 1.0
CD2 A:LEU49 4.1 31.2 1.0
O A:LEU49 4.1 22.2 1.0
CG A:LEU49 4.1 32.7 1.0
CA B:CYS34 4.2 19.4 1.0
CD1 A:LEU49 4.3 37.0 1.0
CA B:ARG35 4.3 20.2 1.0
CA A:LEU49 4.4 26.2 1.0
C A:LEU49 4.4 24.7 1.0
C B:ARG31 4.5 20.7 1.0
CA B:ARG31 4.5 20.5 1.0
O B:CYS34 4.6 18.4 1.0
CB B:ARG35 4.7 19.1 1.0
CB B:ARG31 5.0 21.7 1.0
NE B:ARG35 5.0 38.0 1.0

Reference:

B.F.Volkman, F.C.Peterson, C.A.Bingman, G.N.Phillips Jr.. Crystal Structure of the Scan Domain From Human ZNF24 To Be Published.
Page generated: Wed Oct 28 18:42:49 2020

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