Mercury in PDB 4lsg: Structure of Mouse P-Glycoprotein
Enzymatic activity of Structure of Mouse P-Glycoprotein
All present enzymatic activity of Structure of Mouse P-Glycoprotein:
3.6.3.44;
Protein crystallography data
The structure of Structure of Mouse P-Glycoprotein, PDB code: 4lsg
was solved by
G.Chang,
P.Szewczyk,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
19.98 /
3.80
|
Space group
|
P 21 21 21
|
Cell size a, b, c (Å), α, β, γ (°)
|
97.542,
115.426,
378.858,
90.00,
90.00,
90.00
|
R / Rfree (%)
|
33.6 /
35.7
|
Mercury Binding Sites:
Pages:
>>> Page 1 <<<
Page 2, Binding sites: 11 -
12;
Binding sites:
The binding sites of Mercury atom in the Structure of Mouse P-Glycoprotein
(pdb code 4lsg). This binding sites where shown within
5.0 Angstroms radius around Mercury atom.
In total 12 binding sites of Mercury where determined in the
Structure of Mouse P-Glycoprotein, PDB code: 4lsg:
Jump to Mercury binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Mercury binding site 1 out
of 12 in 4lsg
Go back to
Mercury Binding Sites List in 4lsg
Mercury binding site 1 out
of 12 in the Structure of Mouse P-Glycoprotein
Mono view
Stereo pair view
|
A full contact list of Mercury with other atoms in the Hg binding
site number 1 of Structure of Mouse P-Glycoprotein within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Hg1301
b:1.0
occ:1.00
|
CE3
|
A:TRP132
|
2.3
|
0.2
|
1.0
|
SG
|
A:CYS133
|
2.4
|
0.0
|
1.0
|
CD2
|
A:TRP132
|
2.5
|
0.0
|
1.0
|
CZ3
|
A:TRP132
|
3.0
|
0.9
|
1.0
|
CD2
|
A:PHE934
|
3.0
|
0.2
|
1.0
|
CG
|
A:TRP132
|
3.1
|
93.8
|
1.0
|
CE2
|
A:TRP132
|
3.3
|
80.6
|
1.0
|
CE2
|
A:PHE934
|
3.4
|
0.2
|
1.0
|
CB
|
A:TRP132
|
3.6
|
96.5
|
1.0
|
CH2
|
A:TRP132
|
3.7
|
98.3
|
1.0
|
CZ2
|
A:TRP132
|
3.8
|
85.2
|
1.0
|
N
|
A:CYS133
|
3.9
|
88.2
|
1.0
|
CB
|
A:CYS133
|
3.9
|
0.6
|
1.0
|
CD1
|
A:TRP132
|
4.0
|
71.2
|
1.0
|
CG
|
A:PHE934
|
4.0
|
98.5
|
1.0
|
CA
|
A:CYS133
|
4.1
|
0.3
|
1.0
|
NE1
|
A:TRP132
|
4.1
|
55.4
|
1.0
|
CB
|
A:PHE934
|
4.5
|
87.3
|
1.0
|
C
|
A:TRP132
|
4.5
|
93.6
|
1.0
|
CZ
|
A:PHE934
|
4.6
|
0.1
|
1.0
|
OD2
|
A:ASP184
|
4.6
|
93.3
|
1.0
|
CA
|
A:TRP132
|
4.7
|
96.8
|
1.0
|
|
Mercury binding site 2 out
of 12 in 4lsg
Go back to
Mercury Binding Sites List in 4lsg
Mercury binding site 2 out
of 12 in the Structure of Mouse P-Glycoprotein
Mono view
Stereo pair view
|
A full contact list of Mercury with other atoms in the Hg binding
site number 2 of Structure of Mouse P-Glycoprotein within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Hg1302
b:0.3
occ:0.17
|
SG
|
A:CYS427
|
2.4
|
0.0
|
1.0
|
CB
|
A:CYS427
|
3.6
|
0.8
|
1.0
|
CE2
|
A:TYR397
|
4.6
|
90.8
|
1.0
|
CD2
|
A:TYR397
|
4.6
|
88.3
|
1.0
|
CG1
|
A:ILE405
|
4.8
|
89.8
|
1.0
|
CA
|
A:CYS427
|
5.0
|
0.2
|
1.0
|
|
Mercury binding site 3 out
of 12 in 4lsg
Go back to
Mercury Binding Sites List in 4lsg
Mercury binding site 3 out
of 12 in the Structure of Mouse P-Glycoprotein
Mono view
Stereo pair view
|
A full contact list of Mercury with other atoms in the Hg binding
site number 3 of Structure of Mouse P-Glycoprotein within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Hg1303
b:1.0
occ:1.00
|
SG
|
A:CYS713
|
2.4
|
60.2
|
1.0
|
C
|
A:CYS713
|
2.7
|
90.5
|
1.0
|
CB
|
A:CYS713
|
2.7
|
84.7
|
1.0
|
OG1
|
A:THR765
|
2.8
|
0.6
|
1.0
|
O
|
A:CYS713
|
2.9
|
94.8
|
1.0
|
N
|
A:ALA714
|
3.0
|
94.5
|
1.0
|
CD
|
A:GLN769
|
3.1
|
69.7
|
1.0
|
CB
|
A:GLN769
|
3.1
|
83.4
|
1.0
|
OE1
|
A:GLN769
|
3.2
|
72.4
|
1.0
|
CA
|
A:CYS713
|
3.2
|
95.2
|
1.0
|
NE2
|
A:GLN769
|
3.5
|
65.6
|
1.0
|
CG
|
A:GLN769
|
3.5
|
81.8
|
1.0
|
CA
|
A:ALA714
|
3.6
|
0.9
|
1.0
|
O
|
A:THR765
|
3.8
|
89.4
|
1.0
|
O
|
A:GLY710
|
3.9
|
0.1
|
1.0
|
CB
|
A:THR765
|
4.2
|
95.4
|
1.0
|
CA
|
A:GLN769
|
4.2
|
88.7
|
1.0
|
N
|
A:CYS713
|
4.3
|
97.0
|
1.0
|
CB
|
A:ALA714
|
4.4
|
0.5
|
1.0
|
C
|
A:THR765
|
4.4
|
86.6
|
1.0
|
N
|
A:GLN769
|
4.5
|
89.1
|
1.0
|
CA
|
A:THR765
|
4.6
|
86.5
|
1.0
|
CB
|
A:ASN717
|
4.7
|
96.7
|
1.0
|
C
|
A:ALA714
|
4.8
|
95.0
|
1.0
|
|
Mercury binding site 4 out
of 12 in 4lsg
Go back to
Mercury Binding Sites List in 4lsg
Mercury binding site 4 out
of 12 in the Structure of Mouse P-Glycoprotein
Mono view
Stereo pair view
|
A full contact list of Mercury with other atoms in the Hg binding
site number 4 of Structure of Mouse P-Glycoprotein within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Hg1304
b:1.0
occ:1.00
|
SG
|
A:CYS1070
|
2.4
|
80.0
|
1.0
|
CE2
|
A:TYR1040
|
2.7
|
85.2
|
1.0
|
CB
|
A:CYS1070
|
2.8
|
0.7
|
1.0
|
CZ
|
A:TYR1040
|
3.2
|
93.9
|
1.0
|
OH
|
A:TYR1040
|
3.3
|
90.6
|
1.0
|
CD2
|
A:TYR1040
|
3.5
|
91.0
|
1.0
|
CA
|
A:CYS1070
|
4.3
|
0.9
|
1.0
|
CE1
|
A:TYR1040
|
4.4
|
96.9
|
1.0
|
CG
|
A:TYR1040
|
4.6
|
0.6
|
1.0
|
CG2
|
A:THR1074
|
4.8
|
82.5
|
1.0
|
CD1
|
A:TYR1040
|
4.9
|
0.7
|
1.0
|
|
Mercury binding site 5 out
of 12 in 4lsg
Go back to
Mercury Binding Sites List in 4lsg
Mercury binding site 5 out
of 12 in the Structure of Mouse P-Glycoprotein
Mono view
Stereo pair view
|
A full contact list of Mercury with other atoms in the Hg binding
site number 5 of Structure of Mouse P-Glycoprotein within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Hg1305
b:1.0
occ:1.00
|
O
|
A:ASP1120
|
2.2
|
77.1
|
1.0
|
SG
|
A:CYS1121
|
2.4
|
41.0
|
1.0
|
C
|
A:ASP1120
|
2.7
|
92.9
|
1.0
|
N
|
A:ASP1120
|
3.0
|
0.5
|
1.0
|
CB
|
A:CYS1121
|
3.0
|
82.4
|
1.0
|
NH1
|
A:ARG272
|
3.1
|
96.3
|
1.0
|
CB
|
A:PHE1119
|
3.1
|
0.5
|
1.0
|
OD1
|
A:ASP1120
|
3.2
|
0.3
|
1.0
|
C
|
A:PHE1119
|
3.3
|
0.0
|
1.0
|
NH2
|
A:ARG272
|
3.3
|
92.0
|
1.0
|
CA
|
A:ASP1120
|
3.5
|
0.5
|
1.0
|
N
|
A:CYS1121
|
3.5
|
96.2
|
1.0
|
CZ
|
A:ARG272
|
3.6
|
94.1
|
1.0
|
CA
|
A:PHE1119
|
3.7
|
0.1
|
1.0
|
CA
|
A:CYS1121
|
3.7
|
92.2
|
1.0
|
O
|
A:PHE1119
|
3.8
|
0.4
|
1.0
|
CG
|
A:ASP1120
|
4.0
|
0.2
|
1.0
|
CG
|
A:PHE1119
|
4.3
|
0.9
|
1.0
|
CB
|
A:ASP1120
|
4.3
|
0.2
|
1.0
|
ND2
|
A:ASN1126
|
4.7
|
0.9
|
1.0
|
CD2
|
A:PHE1119
|
4.8
|
0.8
|
1.0
|
NE
|
A:ARG272
|
4.9
|
90.8
|
1.0
|
OD2
|
A:ASP1120
|
4.9
|
0.4
|
1.0
|
OE1
|
A:GLU252
|
5.0
|
86.0
|
1.0
|
N
|
A:PHE1119
|
5.0
|
0.6
|
1.0
|
|
Mercury binding site 6 out
of 12 in 4lsg
Go back to
Mercury Binding Sites List in 4lsg
Mercury binding site 6 out
of 12 in the Structure of Mouse P-Glycoprotein
Mono view
Stereo pair view
|
A full contact list of Mercury with other atoms in the Hg binding
site number 6 of Structure of Mouse P-Glycoprotein within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Hg1306
b:1.0
occ:1.00
|
SG
|
A:CYS1223
|
2.4
|
97.7
|
1.0
|
NH1
|
A:ARG1218
|
2.6
|
49.3
|
1.0
|
CD
|
A:ARG1218
|
2.6
|
84.2
|
1.0
|
NE
|
A:ARG1218
|
3.0
|
78.9
|
1.0
|
CZ
|
A:ARG1218
|
3.0
|
67.2
|
1.0
|
CB
|
A:CYS1223
|
3.2
|
82.0
|
1.0
|
OG1
|
A:THR1061
|
3.4
|
0.6
|
1.0
|
CG
|
A:ARG1218
|
3.7
|
92.7
|
1.0
|
CG1
|
A:VAL1225
|
4.0
|
63.5
|
1.0
|
CG2
|
A:THR1061
|
4.0
|
90.1
|
1.0
|
NH2
|
A:ARG1218
|
4.1
|
74.4
|
1.0
|
CB
|
A:ARG1218
|
4.1
|
96.7
|
1.0
|
CB
|
A:THR1061
|
4.2
|
98.5
|
1.0
|
CB
|
A:VAL1225
|
4.3
|
75.6
|
1.0
|
CA
|
A:CYS1223
|
4.5
|
79.6
|
1.0
|
CD2
|
A:LEU1195
|
4.5
|
79.2
|
1.0
|
C
|
A:CYS1223
|
4.5
|
74.3
|
1.0
|
CA
|
A:THR1061
|
4.7
|
88.2
|
1.0
|
N
|
A:ILE1224
|
4.8
|
68.4
|
1.0
|
O
|
A:CYS1223
|
4.8
|
79.7
|
1.0
|
N
|
A:VAL1225
|
4.8
|
78.5
|
1.0
|
|
Mercury binding site 7 out
of 12 in 4lsg
Go back to
Mercury Binding Sites List in 4lsg
Mercury binding site 7 out
of 12 in the Structure of Mouse P-Glycoprotein
Mono view
Stereo pair view
|
A full contact list of Mercury with other atoms in the Hg binding
site number 7 of Structure of Mouse P-Glycoprotein within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Hg1301
b:1.0
occ:1.00
|
CE3
|
B:TRP132
|
2.4
|
90.4
|
1.0
|
SG
|
B:CYS133
|
2.4
|
0.7
|
1.0
|
CD2
|
B:TRP132
|
2.5
|
89.2
|
1.0
|
CZ3
|
B:TRP132
|
3.0
|
96.0
|
1.0
|
CD2
|
B:PHE934
|
3.1
|
0.2
|
1.0
|
CG
|
B:TRP132
|
3.1
|
86.2
|
1.0
|
CE2
|
B:TRP132
|
3.3
|
78.7
|
1.0
|
CE2
|
B:PHE934
|
3.3
|
0.2
|
1.0
|
CH2
|
B:TRP132
|
3.6
|
91.2
|
1.0
|
CB
|
B:TRP132
|
3.7
|
92.2
|
1.0
|
CZ2
|
B:TRP132
|
3.8
|
79.8
|
1.0
|
N
|
B:CYS133
|
3.8
|
84.9
|
1.0
|
CB
|
B:CYS133
|
3.9
|
94.7
|
1.0
|
CD1
|
B:TRP132
|
3.9
|
65.2
|
1.0
|
CA
|
B:CYS133
|
4.0
|
85.5
|
1.0
|
NE1
|
B:TRP132
|
4.0
|
50.9
|
1.0
|
CG
|
B:PHE934
|
4.1
|
0.5
|
1.0
|
C
|
B:TRP132
|
4.5
|
95.0
|
1.0
|
CZ
|
B:PHE934
|
4.5
|
0.5
|
1.0
|
CB
|
B:PHE934
|
4.7
|
89.1
|
1.0
|
CA
|
B:TRP132
|
4.8
|
96.6
|
1.0
|
OD2
|
B:ASP184
|
4.8
|
98.3
|
1.0
|
|
Mercury binding site 8 out
of 12 in 4lsg
Go back to
Mercury Binding Sites List in 4lsg
Mercury binding site 8 out
of 12 in the Structure of Mouse P-Glycoprotein
Mono view
Stereo pair view
|
A full contact list of Mercury with other atoms in the Hg binding
site number 8 of Structure of Mouse P-Glycoprotein within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Hg1302
b:0.3
occ:0.13
|
SG
|
B:CYS427
|
2.4
|
0.6
|
1.0
|
CB
|
B:CYS427
|
3.7
|
0.5
|
1.0
|
CA
|
B:CYS427
|
4.5
|
0.7
|
1.0
|
N
|
B:CYS427
|
4.8
|
0.1
|
1.0
|
|
Mercury binding site 9 out
of 12 in 4lsg
Go back to
Mercury Binding Sites List in 4lsg
Mercury binding site 9 out
of 12 in the Structure of Mouse P-Glycoprotein
Mono view
Stereo pair view
|
A full contact list of Mercury with other atoms in the Hg binding
site number 9 of Structure of Mouse P-Glycoprotein within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Hg1303
b:1.0
occ:1.00
|
SG
|
B:CYS713
|
2.4
|
57.1
|
1.0
|
CB
|
B:CYS713
|
2.7
|
94.5
|
1.0
|
C
|
B:CYS713
|
2.8
|
98.3
|
1.0
|
CB
|
B:GLN769
|
2.9
|
98.9
|
1.0
|
OG1
|
B:THR765
|
3.0
|
0.1
|
1.0
|
O
|
B:CYS713
|
3.1
|
0.3
|
1.0
|
CD
|
B:GLN769
|
3.1
|
94.9
|
1.0
|
N
|
B:ALA714
|
3.1
|
0.1
|
1.0
|
OE1
|
B:GLN769
|
3.2
|
95.8
|
1.0
|
CA
|
B:CYS713
|
3.3
|
0.5
|
1.0
|
CG
|
B:GLN769
|
3.4
|
99.9
|
1.0
|
NE2
|
B:GLN769
|
3.6
|
90.3
|
1.0
|
CA
|
B:ALA714
|
3.7
|
0.2
|
1.0
|
O
|
B:THR765
|
3.7
|
0.9
|
1.0
|
O
|
B:GLY710
|
3.8
|
0.2
|
1.0
|
CA
|
B:GLN769
|
4.0
|
0.1
|
1.0
|
N
|
B:GLN769
|
4.3
|
0.0
|
1.0
|
CB
|
B:THR765
|
4.3
|
0.9
|
1.0
|
N
|
B:CYS713
|
4.4
|
0.1
|
1.0
|
CB
|
B:ALA714
|
4.4
|
0.5
|
1.0
|
C
|
B:THR765
|
4.5
|
0.4
|
1.0
|
CA
|
B:THR765
|
4.7
|
96.2
|
1.0
|
C
|
B:GLY710
|
4.9
|
0.1
|
1.0
|
CB
|
B:ASN717
|
4.9
|
0.9
|
1.0
|
C
|
B:ALA714
|
4.9
|
0.6
|
1.0
|
|
Mercury binding site 10 out
of 12 in 4lsg
Go back to
Mercury Binding Sites List in 4lsg
Mercury binding site 10 out
of 12 in the Structure of Mouse P-Glycoprotein
Mono view
Stereo pair view
|
A full contact list of Mercury with other atoms in the Hg binding
site number 10 of Structure of Mouse P-Glycoprotein within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Hg1304
b:1.0
occ:1.00
|
SG
|
B:CYS1070
|
2.4
|
95.9
|
1.0
|
CE2
|
B:TYR1040
|
2.7
|
0.4
|
1.0
|
CB
|
B:CYS1070
|
2.8
|
0.4
|
1.0
|
CZ
|
B:TYR1040
|
3.3
|
91.5
|
1.0
|
OH
|
B:TYR1040
|
3.4
|
82.8
|
1.0
|
CD2
|
B:TYR1040
|
3.5
|
0.5
|
1.0
|
CA
|
B:CYS1070
|
4.3
|
0.7
|
1.0
|
CE1
|
B:TYR1040
|
4.4
|
91.2
|
1.0
|
CG
|
B:TYR1040
|
4.6
|
0.1
|
1.0
|
CG2
|
B:THR1074
|
4.7
|
98.3
|
1.0
|
CD1
|
B:TYR1040
|
5.0
|
0.7
|
1.0
|
|
Reference:
G.Chang,
P.Szewczyk.
N/A N/A.
Page generated: Sun Aug 11 04:56:41 2024
|