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Mercury in PDB 4mty: Structure at 2.1 A Reolution of A Helical Aromatic Foldamer-Protein Complex.

Enzymatic activity of Structure at 2.1 A Reolution of A Helical Aromatic Foldamer-Protein Complex.

All present enzymatic activity of Structure at 2.1 A Reolution of A Helical Aromatic Foldamer-Protein Complex.:
4.2.1.1;

Protein crystallography data

The structure of Structure at 2.1 A Reolution of A Helical Aromatic Foldamer-Protein Complex., PDB code: 4mty was solved by T.Ogayone, J.Buratto, B.Langlois D'estaintot, M.Stupfel, T.Granier, B.Gallois, Y.Huc, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 28.85 / 1.00
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 42.444, 41.559, 72.064, 90.00, 104.41, 90.00
R / Rfree (%) 10.5 / 12.3

Other elements in 4mty:

The structure of Structure at 2.1 A Reolution of A Helical Aromatic Foldamer-Protein Complex. also contains other interesting chemical elements:

Zinc (Zn) 1 atom

Mercury Binding Sites:

The binding sites of Mercury atom in the Structure at 2.1 A Reolution of A Helical Aromatic Foldamer-Protein Complex. (pdb code 4mty). This binding sites where shown within 5.0 Angstroms radius around Mercury atom.
In total 2 binding sites of Mercury where determined in the Structure at 2.1 A Reolution of A Helical Aromatic Foldamer-Protein Complex., PDB code: 4mty:
Jump to Mercury binding site number: 1; 2;

Mercury binding site 1 out of 2 in 4mty

Go back to Mercury Binding Sites List in 4mty
Mercury binding site 1 out of 2 in the Structure at 2.1 A Reolution of A Helical Aromatic Foldamer-Protein Complex.


Mono view


Stereo pair view

A full contact list of Mercury with other atoms in the Hg binding site number 1 of Structure at 2.1 A Reolution of A Helical Aromatic Foldamer-Protein Complex. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Hg304

b:5.9
occ:0.50
HG A:HGB304 0.0 5.9 0.5
HG A:HG309 1.3 5.9 0.3
C7 A:HGB304 2.1 6.7 0.5
SG A:CYS205 2.3 5.8 0.5
O A:GLN136 2.9 7.2 1.0
O A:HOH531 2.9 15.2 1.0
C5 A:HGB304 3.0 9.4 0.5
O A:GLU204 3.1 7.5 1.0
C6 A:HGB304 3.1 10.1 0.5
CB A:CYS205 3.2 5.4 0.5
SG A:CYS205 3.3 5.9 0.3
C A:GLN136 3.3 6.9 1.0
C A:GLU204 3.4 5.5 1.0
CA A:CYS205 3.5 5.3 0.5
CA A:CYS205 3.5 5.5 0.5
N A:CYS205 3.6 5.5 0.5
O A:HOH445 3.7 13.4 1.0
N A:GLN136 3.7 7.7 1.0
N A:CYS205 3.7 4.7 0.5
CB A:CYS205 3.8 6.1 0.5
N A:PRO137 3.9 7.2 1.0
CA A:PRO137 4.0 7.7 1.0
CA A:GLN136 4.0 7.1 1.0
O A:HOH637 4.1 29.5 1.0
O A:VAL134 4.1 9.8 1.0
C A:GLN135 4.2 8.0 1.0
N A:GLU204 4.2 5.5 1.0
O A:HOH706 4.2 16.6 0.5
C3 A:HGB304 4.3 9.4 0.5
CA A:GLU204 4.3 5.3 1.0
C4 A:HGB304 4.4 10.0 0.5
C A:VAL134 4.5 8.1 1.0
O A:GLN135 4.6 9.4 1.0
CA A:GLN135 4.7 8.8 1.0
N A:GLN135 4.9 8.3 1.0
CD A:PRO137 4.9 8.8 1.0
C A:LEU203 4.9 5.0 1.0
C2 A:HGB304 4.9 10.1 0.5
C A:CYS205 4.9 4.2 0.3
C A:PRO137 4.9 7.8 1.0
O A:HOH572 5.0 32.9 1.0
CB A:LEU203 5.0 6.5 1.0
CB A:GLU204 5.0 5.9 1.0
C A:CYS205 5.0 4.3 0.5

Mercury binding site 2 out of 2 in 4mty

Go back to Mercury Binding Sites List in 4mty
Mercury binding site 2 out of 2 in the Structure at 2.1 A Reolution of A Helical Aromatic Foldamer-Protein Complex.


Mono view


Stereo pair view

A full contact list of Mercury with other atoms in the Hg binding site number 2 of Structure at 2.1 A Reolution of A Helical Aromatic Foldamer-Protein Complex. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Hg309

b:5.9
occ:0.30
HG A:HGB304 1.3 5.9 0.5
SG A:CYS205 1.3 5.8 0.5
SG A:CYS205 2.3 5.9 0.3
O A:HOH531 2.5 15.2 1.0
CB A:CYS205 2.7 5.4 0.5
O A:VAL134 3.1 9.8 1.0
C7 A:HGB304 3.2 6.7 0.5
CB A:CYS205 3.2 6.1 0.5
O A:GLN136 3.3 7.2 1.0
CA A:CYS205 3.5 5.3 0.5
CA A:CYS205 3.5 5.5 0.5
C A:VAL134 3.6 8.1 1.0
N A:CYS205 3.6 5.5 0.5
N A:GLN136 3.7 7.7 1.0
O A:HOH445 3.7 13.4 1.0
N A:CYS205 3.7 4.7 0.5
C A:GLU204 3.8 5.5 1.0
O A:GLU204 3.8 7.5 1.0
C A:GLN136 3.9 6.9 1.0
CB A:LEU203 4.1 6.5 1.0
C A:GLN135 4.1 8.0 1.0
N A:GLU204 4.1 5.5 1.0
C6 A:HGB304 4.1 10.1 0.5
N A:GLN135 4.2 8.3 1.0
CA A:VAL134 4.2 7.7 1.0
C5 A:HGB304 4.2 9.4 0.5
CA A:GLN135 4.2 8.8 1.0
CA A:GLN136 4.4 7.1 1.0
O A:HOH637 4.4 29.5 1.0
C A:LEU203 4.5 5.0 1.0
CA A:GLU204 4.6 5.3 1.0
O A:ALA133 4.7 7.2 1.0
N A:PRO137 4.7 7.2 1.0
CA A:LEU203 4.8 5.5 1.0
O A:GLN135 4.9 9.4 1.0
C A:CYS205 4.9 4.2 0.3
CB A:VAL134 5.0 8.3 1.0
C A:CYS205 5.0 4.3 0.5
CA A:PRO137 5.0 7.7 1.0
CG A:LEU203 5.0 8.6 1.0

Reference:

J.Buratto, C.Colombo, M.Stupfel, S.J.Dawson, C.Dolain, B.Langlois D'estaintot, L.Fischer, T.Granier, M.Laguerre, B.Gallois, I.Huc. Structure of A Complex Formed By A Protein and A Helical Aromatic Oligoamide Foldamer at 2.1 A Resolution. Angew.Chem.Int.Ed.Engl. V. 53 883 2014.
ISSN: ISSN 1433-7851
PubMed: 24288253
DOI: 10.1002/ANIE.201309160
Page generated: Sun Dec 13 19:11:29 2020

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