Atomistry » Mercury » PDB 4ihd-4q7w » 4mty
Atomistry »
  Mercury »
    PDB 4ihd-4q7w »
      4mty »

Mercury in PDB 4mty: Structure at 2.1 A Reolution of A Helical Aromatic Foldamer-Protein Complex.

Enzymatic activity of Structure at 2.1 A Reolution of A Helical Aromatic Foldamer-Protein Complex.

All present enzymatic activity of Structure at 2.1 A Reolution of A Helical Aromatic Foldamer-Protein Complex.:
4.2.1.1;

Protein crystallography data

The structure of Structure at 2.1 A Reolution of A Helical Aromatic Foldamer-Protein Complex., PDB code: 4mty was solved by T.Ogayone, J.Buratto, B.Langlois D'estaintot, M.Stupfel, T.Granier, B.Gallois, Y.Huc, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 28.85 / 1.00
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 42.444, 41.559, 72.064, 90.00, 104.41, 90.00
R / Rfree (%) 10.5 / 12.3

Other elements in 4mty:

The structure of Structure at 2.1 A Reolution of A Helical Aromatic Foldamer-Protein Complex. also contains other interesting chemical elements:

Zinc (Zn) 1 atom

Mercury Binding Sites:

The binding sites of Mercury atom in the Structure at 2.1 A Reolution of A Helical Aromatic Foldamer-Protein Complex. (pdb code 4mty). This binding sites where shown within 5.0 Angstroms radius around Mercury atom.
In total 2 binding sites of Mercury where determined in the Structure at 2.1 A Reolution of A Helical Aromatic Foldamer-Protein Complex., PDB code: 4mty:
Jump to Mercury binding site number: 1; 2;

Mercury binding site 1 out of 2 in 4mty

Go back to Mercury Binding Sites List in 4mty
Mercury binding site 1 out of 2 in the Structure at 2.1 A Reolution of A Helical Aromatic Foldamer-Protein Complex.


Mono view


Stereo pair view

A full contact list of Mercury with other atoms in the Hg binding site number 1 of Structure at 2.1 A Reolution of A Helical Aromatic Foldamer-Protein Complex. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Hg304

b:5.9
occ:0.50
HG A:HGB304 0.0 5.9 0.5
HG A:HG309 1.3 5.9 0.3
C7 A:HGB304 2.1 6.7 0.5
SG A:CYS205 2.3 5.8 0.5
O A:GLN136 2.9 7.2 1.0
O A:HOH531 2.9 15.2 1.0
C5 A:HGB304 3.0 9.4 0.5
O A:GLU204 3.1 7.5 1.0
C6 A:HGB304 3.1 10.1 0.5
CB A:CYS205 3.2 5.4 0.5
SG A:CYS205 3.3 5.9 0.3
C A:GLN136 3.3 6.9 1.0
C A:GLU204 3.4 5.5 1.0
CA A:CYS205 3.5 5.3 0.5
CA A:CYS205 3.5 5.5 0.5
N A:CYS205 3.6 5.5 0.5
O A:HOH445 3.7 13.4 1.0
N A:GLN136 3.7 7.7 1.0
N A:CYS205 3.7 4.7 0.5
CB A:CYS205 3.8 6.1 0.5
N A:PRO137 3.9 7.2 1.0
CA A:PRO137 4.0 7.7 1.0
CA A:GLN136 4.0 7.1 1.0
O A:HOH637 4.1 29.5 1.0
O A:VAL134 4.1 9.8 1.0
C A:GLN135 4.2 8.0 1.0
N A:GLU204 4.2 5.5 1.0
O A:HOH706 4.2 16.6 0.5
C3 A:HGB304 4.3 9.4 0.5
CA A:GLU204 4.3 5.3 1.0
C4 A:HGB304 4.4 10.0 0.5
C A:VAL134 4.5 8.1 1.0
O A:GLN135 4.6 9.4 1.0
CA A:GLN135 4.7 8.8 1.0
N A:GLN135 4.9 8.3 1.0
CD A:PRO137 4.9 8.8 1.0
C A:LEU203 4.9 5.0 1.0
C2 A:HGB304 4.9 10.1 0.5
C A:CYS205 4.9 4.2 0.3
C A:PRO137 4.9 7.8 1.0
O A:HOH572 5.0 32.9 1.0
CB A:LEU203 5.0 6.5 1.0
CB A:GLU204 5.0 5.9 1.0
C A:CYS205 5.0 4.3 0.5

Mercury binding site 2 out of 2 in 4mty

Go back to Mercury Binding Sites List in 4mty
Mercury binding site 2 out of 2 in the Structure at 2.1 A Reolution of A Helical Aromatic Foldamer-Protein Complex.


Mono view


Stereo pair view

A full contact list of Mercury with other atoms in the Hg binding site number 2 of Structure at 2.1 A Reolution of A Helical Aromatic Foldamer-Protein Complex. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Hg309

b:5.9
occ:0.30
HG A:HGB304 1.3 5.9 0.5
SG A:CYS205 1.3 5.8 0.5
SG A:CYS205 2.3 5.9 0.3
O A:HOH531 2.5 15.2 1.0
CB A:CYS205 2.7 5.4 0.5
O A:VAL134 3.1 9.8 1.0
C7 A:HGB304 3.2 6.7 0.5
CB A:CYS205 3.2 6.1 0.5
O A:GLN136 3.3 7.2 1.0
CA A:CYS205 3.5 5.3 0.5
CA A:CYS205 3.5 5.5 0.5
C A:VAL134 3.6 8.1 1.0
N A:CYS205 3.6 5.5 0.5
N A:GLN136 3.7 7.7 1.0
O A:HOH445 3.7 13.4 1.0
N A:CYS205 3.7 4.7 0.5
C A:GLU204 3.8 5.5 1.0
O A:GLU204 3.8 7.5 1.0
C A:GLN136 3.9 6.9 1.0
CB A:LEU203 4.1 6.5 1.0
C A:GLN135 4.1 8.0 1.0
N A:GLU204 4.1 5.5 1.0
C6 A:HGB304 4.1 10.1 0.5
N A:GLN135 4.2 8.3 1.0
CA A:VAL134 4.2 7.7 1.0
C5 A:HGB304 4.2 9.4 0.5
CA A:GLN135 4.2 8.8 1.0
CA A:GLN136 4.4 7.1 1.0
O A:HOH637 4.4 29.5 1.0
C A:LEU203 4.5 5.0 1.0
CA A:GLU204 4.6 5.3 1.0
O A:ALA133 4.7 7.2 1.0
N A:PRO137 4.7 7.2 1.0
CA A:LEU203 4.8 5.5 1.0
O A:GLN135 4.9 9.4 1.0
C A:CYS205 4.9 4.2 0.3
CB A:VAL134 5.0 8.3 1.0
C A:CYS205 5.0 4.3 0.5
CA A:PRO137 5.0 7.7 1.0
CG A:LEU203 5.0 8.6 1.0

Reference:

J.Buratto, C.Colombo, M.Stupfel, S.J.Dawson, C.Dolain, B.Langlois D'estaintot, L.Fischer, T.Granier, M.Laguerre, B.Gallois, I.Huc. Structure of A Complex Formed By A Protein and A Helical Aromatic Oligoamide Foldamer at 2.1 A Resolution. Angew.Chem.Int.Ed.Engl. V. 53 883 2014.
ISSN: ISSN 1433-7851
PubMed: 24288253
DOI: 10.1002/ANIE.201309160
Page generated: Sun Dec 13 19:11:29 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy