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Mercury in PDB 5ez7: Crystal Structure of the Fad Dependent Oxidoreductase PA4991 From Pseudomonas Aeruginosa

Protein crystallography data

The structure of Crystal Structure of the Fad Dependent Oxidoreductase PA4991 From Pseudomonas Aeruginosa, PDB code: 5ez7 was solved by A.Jacewicz, R.Schnell, Y.Lindqvist, G.Schneider, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.60 / 2.40
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 37.890, 79.830, 63.230, 90.00, 104.40, 90.00
R / Rfree (%) 17.3 / 22.8

Mercury Binding Sites:

The binding sites of Mercury atom in the Crystal Structure of the Fad Dependent Oxidoreductase PA4991 From Pseudomonas Aeruginosa (pdb code 5ez7). This binding sites where shown within 5.0 Angstroms radius around Mercury atom.
In total 2 binding sites of Mercury where determined in the Crystal Structure of the Fad Dependent Oxidoreductase PA4991 From Pseudomonas Aeruginosa, PDB code: 5ez7:
Jump to Mercury binding site number: 1; 2;

Mercury binding site 1 out of 2 in 5ez7

Go back to Mercury Binding Sites List in 5ez7
Mercury binding site 1 out of 2 in the Crystal Structure of the Fad Dependent Oxidoreductase PA4991 From Pseudomonas Aeruginosa


Mono view


Stereo pair view

A full contact list of Mercury with other atoms in the Hg binding site number 1 of Crystal Structure of the Fad Dependent Oxidoreductase PA4991 From Pseudomonas Aeruginosa within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Hg402

b:57.1
occ:0.35
SG A:CYS245 1.8 54.8 1.0
HG A:HG403 2.6 45.1 0.3
O A:HOH538 2.9 45.3 1.0
CB A:CYS245 3.2 47.8 1.0
O A:LEU246 3.6 68.6 1.0
O A:TRP103 3.6 53.1 1.0
CA A:CYS245 3.9 47.0 1.0
NE1 A:TRP103 3.9 49.3 1.0
CE2 A:TRP103 3.9 47.0 1.0
CD2 A:LEU298 4.0 43.9 1.0
CD2 A:TRP103 4.1 47.2 1.0
CD1 A:TRP103 4.1 49.6 1.0
N A:LEU246 4.1 55.8 1.0
CG A:TRP103 4.2 49.0 1.0
C A:CYS245 4.2 49.2 1.0
C A:TRP103 4.3 55.5 1.0
C A:LEU246 4.4 69.1 1.0
CZ2 A:TRP103 4.4 46.5 1.0
CD1 A:LEU298 4.7 41.9 1.0
CE3 A:TRP103 4.7 46.7 1.0
C A:SER104 4.8 76.1 1.0
N A:SER104 4.8 63.3 1.0
CG A:LEU298 4.9 42.1 1.0
CA A:LEU246 4.9 63.2 1.0
CB A:TRP103 4.9 49.2 1.0
O A:SER104 4.9 75.2 1.0
CA A:SER104 5.0 70.0 1.0
CH2 A:TRP103 5.0 45.5 1.0

Mercury binding site 2 out of 2 in 5ez7

Go back to Mercury Binding Sites List in 5ez7
Mercury binding site 2 out of 2 in the Crystal Structure of the Fad Dependent Oxidoreductase PA4991 From Pseudomonas Aeruginosa


Mono view


Stereo pair view

A full contact list of Mercury with other atoms in the Hg binding site number 2 of Crystal Structure of the Fad Dependent Oxidoreductase PA4991 From Pseudomonas Aeruginosa within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Hg403

b:45.1
occ:0.35
SG A:CYS245 1.5 54.8 1.0
HG A:HG402 2.6 57.1 0.3
CB A:CYS245 3.0 47.8 1.0
CD A:ARG253 3.4 65.1 1.0
CB A:ARG253 3.6 56.7 1.0
C A:CYS245 3.6 49.2 1.0
O A:LEU246 3.7 68.6 1.0
CG A:ARG253 3.7 61.0 1.0
C A:LEU246 3.7 69.1 1.0
O A:CYS245 3.8 47.1 1.0
NE A:ARG253 3.9 67.1 1.0
CA A:CYS245 3.9 47.0 1.0
N A:GLY247 3.9 76.6 1.0
N A:LEU246 4.0 55.8 1.0
CD2 A:LEU298 4.0 43.9 1.0
CD1 A:LEU298 4.1 41.9 1.0
CA A:LEU246 4.4 63.2 1.0
CA A:GLY247 4.6 82.5 1.0
CG A:LEU298 4.8 42.1 1.0
CA A:ARG253 5.0 53.2 1.0

Reference:

A.Jacewicz, R.Schnell, Y.Lindqvist, G.Schneider. Crystal Structure of the Flavoenzyme PA4991 From Pseudomonas Aeruginosa. Acta Crystallogr.,Sect.F V. 72 105 2016.
ISSN: ESSN 2053-230X
PubMed: 26841760
DOI: 10.1107/S2053230X15024437
Page generated: Sun Dec 13 19:12:33 2020

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