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Mercury in PDB 6ego: Crystal Structure of A De Novo Three-Stranded Coiled Coil Peptide Containing An Ala Residue in the Second Coordination Sphere of the Hg(II)S3 Binding Site

Protein crystallography data

The structure of Crystal Structure of A De Novo Three-Stranded Coiled Coil Peptide Containing An Ala Residue in the Second Coordination Sphere of the Hg(II)S3 Binding Site, PDB code: 6ego was solved by L.Ruckthong, J.A.Stuckey, V.L.Pecoraro, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 24.23 / 1.93
Space group H 3 2
Cell size a, b, c (Å), α, β, γ (°) 38.186, 38.186, 142.345, 90.00, 90.00, 120.00
R / Rfree (%) 22 / 25.2

Other elements in 6ego:

The structure of Crystal Structure of A De Novo Three-Stranded Coiled Coil Peptide Containing An Ala Residue in the Second Coordination Sphere of the Hg(II)S3 Binding Site also contains other interesting chemical elements:

Zinc (Zn) 1 atom

Mercury Binding Sites:

The binding sites of Mercury atom in the Crystal Structure of A De Novo Three-Stranded Coiled Coil Peptide Containing An Ala Residue in the Second Coordination Sphere of the Hg(II)S3 Binding Site (pdb code 6ego). This binding sites where shown within 5.0 Angstroms radius around Mercury atom.
In total only one binding site of Mercury was determined in the Crystal Structure of A De Novo Three-Stranded Coiled Coil Peptide Containing An Ala Residue in the Second Coordination Sphere of the Hg(II)S3 Binding Site, PDB code: 6ego:

Mercury binding site 1 out of 1 in 6ego

Go back to Mercury Binding Sites List in 6ego
Mercury binding site 1 out of 1 in the Crystal Structure of A De Novo Three-Stranded Coiled Coil Peptide Containing An Ala Residue in the Second Coordination Sphere of the Hg(II)S3 Binding Site


Mono view


Stereo pair view

A full contact list of Mercury with other atoms in the Hg binding site number 1 of Crystal Structure of A De Novo Three-Stranded Coiled Coil Peptide Containing An Ala Residue in the Second Coordination Sphere of the Hg(II)S3 Binding Site within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Hg102

b:46.5
occ:0.19
SG A:CYS16 2.4 59.4 0.8
SG A:CYS16 2.7 48.8 0.2
CB A:CYS16 3.4 47.7 0.8
CB A:CYS16 3.4 47.6 0.2
O A:HOH213 3.5 48.0 0.3
CA A:CYS16 3.9 46.0 0.8
CA A:CYS16 3.9 46.7 0.2
O A:HOH209 4.3 44.1 1.0
N A:CYS16 4.7 37.9 1.0

Reference:

L.Ruckthong, J.A.Stuckey, V.L.Pecoraro. How Outer Coordination Sphere Modifications Can Impact Metal Structures in Proteins: A Crystallographic Evaluation. Chemistry V. 25 6773 2019.
ISSN: ISSN 0947-6539
PubMed: 30861211
DOI: 10.1002/CHEM.201806040
Page generated: Sun Dec 13 19:13:53 2020

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