Atomistry » Mercury » PDB 6bzi-6rjj » 6gm9
Atomistry »
  Mercury »
    PDB 6bzi-6rjj »
      6gm9 »

Mercury in PDB 6gm9: Human Carbonic Anhydrase II in Complex with 4-Methylbenzenesulfonamide

Enzymatic activity of Human Carbonic Anhydrase II in Complex with 4-Methylbenzenesulfonamide

All present enzymatic activity of Human Carbonic Anhydrase II in Complex with 4-Methylbenzenesulfonamide:
4.2.1.1;

Protein crystallography data

The structure of Human Carbonic Anhydrase II in Complex with 4-Methylbenzenesulfonamide, PDB code: 6gm9 was solved by S.Gloeckner, A.Heine, G.Klebe, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 23.79 / 1.09
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 42.365, 41.472, 72.273, 90.00, 104.66, 90.00
R / Rfree (%) 10.3 / 11.8

Other elements in 6gm9:

The structure of Human Carbonic Anhydrase II in Complex with 4-Methylbenzenesulfonamide also contains other interesting chemical elements:

Zinc (Zn) 1 atom

Mercury Binding Sites:

The binding sites of Mercury atom in the Human Carbonic Anhydrase II in Complex with 4-Methylbenzenesulfonamide (pdb code 6gm9). This binding sites where shown within 5.0 Angstroms radius around Mercury atom.
In total 2 binding sites of Mercury where determined in the Human Carbonic Anhydrase II in Complex with 4-Methylbenzenesulfonamide, PDB code: 6gm9:
Jump to Mercury binding site number: 1; 2;

Mercury binding site 1 out of 2 in 6gm9

Go back to Mercury Binding Sites List in 6gm9
Mercury binding site 1 out of 2 in the Human Carbonic Anhydrase II in Complex with 4-Methylbenzenesulfonamide


Mono view


Stereo pair view

A full contact list of Mercury with other atoms in the Hg binding site number 1 of Human Carbonic Anhydrase II in Complex with 4-Methylbenzenesulfonamide within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Hg302

b:7.6
occ:0.16
HG A:MBO307 1.3 9.7 0.8
SG A:CYS206 1.3 8.3 0.8
HB3 A:CYS206 2.0 7.5 0.2
SG A:CYS206 2.5 6.7 0.2
O A:HOH544 2.5 15.7 1.0
CB A:CYS206 2.6 6.3 0.2
CB A:CYS206 2.8 6.9 0.8
HB3 A:CYS206 3.1 8.3 0.8
O A:VAL135 3.1 10.8 1.0
O A:GLN137 3.2 7.4 1.0
CE1 A:MBO307 3.3 10.8 0.8
HB3 A:LEU204 3.3 9.0 1.0
HB2 A:CYS206 3.3 7.5 0.2
HA A:CYS206 3.3 6.8 0.8
H A:GLN137 3.4 9.6 0.5
H A:GLN137 3.4 9.6 0.5
CA A:CYS206 3.5 5.7 0.8
CA A:CYS206 3.5 6.2 0.2
HA A:VAL135 3.5 11.2 1.0
C A:VAL135 3.5 9.0 1.0
HB2 A:CYS206 3.5 8.3 0.8
HA A:CYS206 3.6 7.4 0.2
N A:CYS206 3.6 6.2 0.2
N A:GLN137 3.7 8.0 1.0
N A:CYS206 3.7 5.9 0.8
C A:GLU205 3.8 6.6 1.0
O A:GLU205 3.8 8.0 1.0
HA A:GLN136 3.9 11.7 1.0
O A:HOH575 3.9 13.6 1.0
C A:GLN137 3.9 7.4 1.0
H A:GLU205 4.0 7.7 1.0
H A:CYS206 4.0 7.5 0.2
CE2 A:MBO307 4.1 11.2 0.8
C A:GLN136 4.1 9.1 1.0
CA A:VAL135 4.1 9.4 1.0
N A:GLN136 4.1 9.0 1.0
N A:GLU205 4.2 6.4 1.0
H A:CYS206 4.2 7.1 0.8
CB A:LEU204 4.2 7.5 1.0
CA A:GLN136 4.2 9.7 1.0
CE6 A:MBO307 4.3 10.9 0.8
HA A:PRO138 4.3 10.0 0.5
HB A:VAL135 4.3 12.5 1.0
HA A:PRO138 4.3 9.9 0.6
CA A:GLN137 4.4 7.8 1.0
HB2 A:LEU204 4.4 9.0 1.0
HD13 A:LEU204 4.5 13.1 1.0
C A:LEU204 4.6 5.8 1.0
O A:ALA134 4.6 8.1 1.0
CA A:GLU205 4.6 6.5 1.0
HD22 A:LEU204 4.6 14.3 1.0
O A:HOH639 4.7 34.9 1.0
N A:PRO138 4.7 7.7 0.6
N A:PRO138 4.7 7.8 0.5
H A:GLN136 4.8 10.8 1.0
CB A:VAL135 4.8 10.4 1.0
O A:GLN136 4.8 10.2 1.0
HA A:GLN137 4.9 9.3 1.0
C A:CYS206 4.9 6.0 0.2
CA A:LEU204 4.9 6.5 1.0
C A:CYS206 4.9 5.7 0.8
CA A:PRO138 5.0 8.3 0.6
CA A:PRO138 5.0 8.3 0.5

Mercury binding site 2 out of 2 in 6gm9

Go back to Mercury Binding Sites List in 6gm9
Mercury binding site 2 out of 2 in the Human Carbonic Anhydrase II in Complex with 4-Methylbenzenesulfonamide


Mono view


Stereo pair view

A full contact list of Mercury with other atoms in the Hg binding site number 2 of Human Carbonic Anhydrase II in Complex with 4-Methylbenzenesulfonamide within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Hg307

b:9.7
occ:0.84
HG A:MBO307 0.0 9.7 0.8
HG A:HG302 1.3 7.6 0.2
CE1 A:MBO307 2.1 10.8 0.8
HB3 A:CYS206 2.2 7.5 0.2
SG A:CYS206 2.4 8.3 0.8
O A:GLN137 3.0 7.4 1.0
O A:HOH544 3.0 15.7 1.0
CE6 A:MBO307 3.0 10.9 0.8
CB A:CYS206 3.0 6.3 0.2
O A:GLU205 3.0 8.0 1.0
HA A:CYS206 3.1 6.8 0.8
CE2 A:MBO307 3.1 11.2 0.8
HA A:PRO138 3.3 10.0 0.5
HA A:CYS206 3.3 7.4 0.2
HA A:PRO138 3.3 9.9 0.6
C A:GLN137 3.4 7.4 1.0
C A:GLU205 3.4 6.6 1.0
CB A:CYS206 3.4 6.9 0.8
SG A:CYS206 3.5 6.7 0.2
CA A:CYS206 3.5 6.2 0.2
CA A:CYS206 3.5 5.7 0.8
HB3 A:CYS206 3.6 8.3 0.8
N A:CYS206 3.6 6.2 0.2
N A:CYS206 3.7 5.9 0.8
H A:GLN137 3.7 9.6 0.5
H A:GLN137 3.7 9.6 0.5
O A:HOH575 3.8 13.6 1.0
HB2 A:CYS206 3.8 7.5 0.2
N A:GLN137 3.8 8.0 1.0
N A:PRO138 3.9 7.7 0.6
N A:PRO138 3.9 7.8 0.5
H A:GLU205 4.0 7.7 1.0
CA A:PRO138 4.0 8.3 0.5
CA A:PRO138 4.0 8.3 0.6
CA A:GLN137 4.1 7.8 1.0
HB3 A:LEU204 4.2 9.0 1.0
C A:GLN136 4.2 9.1 1.0
N A:GLU205 4.2 6.4 1.0
O A:VAL135 4.2 10.8 1.0
HB2 A:CYS206 4.3 8.3 0.8
H A:CYS206 4.3 7.5 0.2
CA A:GLU205 4.3 6.5 1.0
CE5 A:MBO307 4.4 11.7 0.8
H A:CYS206 4.4 7.1 0.8
HA A:GLN136 4.4 11.7 1.0
CE3 A:MBO307 4.4 11.4 0.8
HA A:GLN137 4.5 9.3 1.0
HB2 A:GLU205 4.5 8.1 1.0
O A:HOH639 4.6 34.9 1.0
C A:VAL135 4.6 9.0 1.0
HA A:VAL135 4.7 11.2 1.0
HD3 A:PRO138 4.7 10.3 0.6
O A:GLN136 4.7 10.2 1.0
CA A:GLN136 4.7 9.7 1.0
HB3 A:PRO138 4.7 11.7 0.5
HD3 A:PRO138 4.8 10.6 0.5
HG3 A:PRO138 4.8 11.1 0.6
CD A:PRO138 4.8 8.6 0.6
C A:PRO138 4.9 7.0 0.6
O A:HOH633 4.9 29.5 1.0
CE4 A:MBO307 4.9 11.9 0.8
N A:GLN136 4.9 9.0 1.0
CB A:GLU205 4.9 6.8 1.0
C A:LEU204 5.0 5.8 1.0
CD A:PRO138 5.0 8.8 0.5
C A:CYS206 5.0 5.7 0.8
C A:CYS206 5.0 6.0 0.2
C A:PRO138 5.0 7.5 0.5

Reference:

S.Gloeckner, A.Heine, G.Klebe. Human Carbonic Anhydrase II in Complex with 4-Methylbenzenesulfonamide To Be Published.
Page generated: Sun Aug 11 07:19:31 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy