Mercury in PDB 6sey: Human Carbonic Anhydrase II in Complex with Aliphatically Substituted Benzenesulfonamide
Enzymatic activity of Human Carbonic Anhydrase II in Complex with Aliphatically Substituted Benzenesulfonamide
All present enzymatic activity of Human Carbonic Anhydrase II in Complex with Aliphatically Substituted Benzenesulfonamide:
4.2.1.1;
Protein crystallography data
The structure of Human Carbonic Anhydrase II in Complex with Aliphatically Substituted Benzenesulfonamide, PDB code: 6sey
was solved by
S.Gloeckner,
K.Ngo,
A.Heine,
G.Klebe,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
41.28 /
1.23
|
Space group
|
P 1 21 1
|
Cell size a, b, c (Å), α, β, γ (°)
|
42.671,
41.842,
72.836,
90.00,
104.68,
90.00
|
R / Rfree (%)
|
11 /
12.5
|
Other elements in 6sey:
The structure of Human Carbonic Anhydrase II in Complex with Aliphatically Substituted Benzenesulfonamide also contains other interesting chemical elements:
Mercury Binding Sites:
The binding sites of Mercury atom in the Human Carbonic Anhydrase II in Complex with Aliphatically Substituted Benzenesulfonamide
(pdb code 6sey). This binding sites where shown within
5.0 Angstroms radius around Mercury atom.
In total 2 binding sites of Mercury where determined in the
Human Carbonic Anhydrase II in Complex with Aliphatically Substituted Benzenesulfonamide, PDB code: 6sey:
Jump to Mercury binding site number:
1;
2;
Mercury binding site 1 out
of 2 in 6sey
Go back to
Mercury Binding Sites List in 6sey
Mercury binding site 1 out
of 2 in the Human Carbonic Anhydrase II in Complex with Aliphatically Substituted Benzenesulfonamide
Mono view
Stereo pair view
|
A full contact list of Mercury with other atoms in the Hg binding
site number 1 of Human Carbonic Anhydrase II in Complex with Aliphatically Substituted Benzenesulfonamide within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Hg302
b:11.2
occ:0.19
|
SG
|
A:CYS206
|
1.2
|
9.2
|
0.8
|
HG
|
A:BE7303
|
1.3
|
7.6
|
0.6
|
HB3
|
A:CYS206
|
1.7
|
12.6
|
0.2
|
O
|
A:HOH540
|
2.4
|
23.8
|
1.0
|
CB
|
A:CYS206
|
2.6
|
10.5
|
0.2
|
CB
|
A:CYS206
|
2.7
|
7.4
|
0.8
|
HB3
|
A:CYS206
|
3.0
|
8.9
|
0.8
|
SG
|
A:CYS206
|
3.1
|
13.5
|
0.2
|
HG
|
A:CYS206
|
3.1
|
16.2
|
0.2
|
O
|
A:VAL135
|
3.2
|
12.3
|
1.0
|
HB3
|
A:LEU204
|
3.2
|
9.7
|
1.0
|
HB2
|
A:CYS206
|
3.2
|
12.6
|
0.2
|
O
|
A:GLN137
|
3.3
|
8.3
|
1.0
|
HA
|
A:CYS206
|
3.3
|
7.0
|
0.8
|
HB2
|
A:CYS206
|
3.4
|
8.9
|
0.8
|
CA
|
A:CYS206
|
3.4
|
5.8
|
0.8
|
H
|
A:GLN137
|
3.5
|
10.6
|
0.6
|
CA
|
A:CYS206
|
3.5
|
7.8
|
0.2
|
C5
|
A:BE7303
|
3.5
|
7.3
|
0.6
|
HA
|
A:CYS206
|
3.5
|
9.4
|
0.2
|
H
|
A:GLN137
|
3.5
|
10.6
|
0.4
|
N
|
A:CYS206
|
3.6
|
6.9
|
0.2
|
C
|
A:VAL135
|
3.6
|
9.9
|
1.0
|
N
|
A:CYS206
|
3.6
|
5.5
|
0.8
|
HA
|
A:VAL135
|
3.6
|
12.0
|
1.0
|
C
|
A:GLU205
|
3.7
|
6.4
|
1.0
|
O
|
A:HOH529
|
3.8
|
15.5
|
1.0
|
O
|
A:GLU205
|
3.8
|
8.4
|
1.0
|
N
|
A:GLN137
|
3.8
|
8.8
|
1.0
|
HA
|
A:GLN136
|
3.9
|
11.8
|
0.6
|
H
|
A:GLU205
|
3.9
|
7.8
|
1.0
|
C
|
A:GLN137
|
4.0
|
8.0
|
1.0
|
HA
|
A:GLN136
|
4.0
|
12.6
|
0.4
|
H
|
A:CYS206
|
4.0
|
8.3
|
0.2
|
N
|
A:GLU205
|
4.1
|
6.5
|
1.0
|
H
|
A:CYS206
|
4.1
|
6.7
|
0.8
|
C
|
A:GLN136
|
4.1
|
9.6
|
0.4
|
CB
|
A:LEU204
|
4.2
|
8.1
|
1.0
|
CA
|
A:VAL135
|
4.2
|
10.0
|
1.0
|
N
|
A:GLN136
|
4.2
|
9.7
|
0.6
|
N
|
A:GLN136
|
4.2
|
10.2
|
0.4
|
C
|
A:GLN136
|
4.2
|
9.8
|
0.6
|
C4
|
A:BE7303
|
4.2
|
8.5
|
0.6
|
CA
|
A:GLN136
|
4.3
|
9.8
|
0.6
|
CA
|
A:GLN136
|
4.3
|
10.5
|
0.4
|
HB2
|
A:LEU204
|
4.4
|
9.7
|
1.0
|
HA
|
A:PRO138
|
4.4
|
10.9
|
1.0
|
HD13
|
A:LEU204
|
4.4
|
14.5
|
1.0
|
HB
|
A:VAL135
|
4.4
|
13.8
|
1.0
|
C6
|
A:BE7303
|
4.4
|
9.2
|
0.6
|
C
|
A:LEU204
|
4.5
|
5.9
|
1.0
|
CA
|
A:GLN137
|
4.5
|
7.9
|
1.0
|
CA
|
A:GLU205
|
4.5
|
6.8
|
1.0
|
HD22
|
A:LEU204
|
4.6
|
15.7
|
1.0
|
O
|
A:ALA134
|
4.7
|
8.7
|
1.0
|
O
|
A:GLN136
|
4.7
|
10.4
|
0.4
|
N
|
A:PRO138
|
4.8
|
8.0
|
1.0
|
H
|
A:GLN136
|
4.9
|
11.7
|
0.6
|
CA
|
A:LEU204
|
4.9
|
6.5
|
1.0
|
C
|
A:CYS206
|
4.9
|
6.7
|
0.2
|
H
|
A:GLN136
|
4.9
|
12.2
|
0.4
|
C
|
A:CYS206
|
4.9
|
5.9
|
0.8
|
CB
|
A:VAL135
|
4.9
|
11.5
|
1.0
|
HA
|
A:GLN137
|
5.0
|
9.5
|
1.0
|
HA
|
A:LEU204
|
5.0
|
7.8
|
1.0
|
|
Mercury binding site 2 out
of 2 in 6sey
Go back to
Mercury Binding Sites List in 6sey
Mercury binding site 2 out
of 2 in the Human Carbonic Anhydrase II in Complex with Aliphatically Substituted Benzenesulfonamide
Mono view
Stereo pair view
|
A full contact list of Mercury with other atoms in the Hg binding
site number 2 of Human Carbonic Anhydrase II in Complex with Aliphatically Substituted Benzenesulfonamide within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Hg303
b:7.6
occ:0.58
|
HG
|
A:BE7303
|
0.0
|
7.6
|
0.6
|
HG
|
A:HG302
|
1.3
|
11.2
|
0.2
|
HB3
|
A:CYS206
|
2.2
|
12.6
|
0.2
|
C5
|
A:BE7303
|
2.2
|
7.3
|
0.6
|
SG
|
A:CYS206
|
2.4
|
9.2
|
0.8
|
O
|
A:HOH540
|
2.8
|
23.8
|
1.0
|
O
|
A:GLN137
|
3.0
|
8.3
|
1.0
|
O
|
A:GLU205
|
3.1
|
8.4
|
1.0
|
HA
|
A:CYS206
|
3.1
|
7.0
|
0.8
|
C6
|
A:BE7303
|
3.1
|
9.2
|
0.6
|
CB
|
A:CYS206
|
3.1
|
10.5
|
0.2
|
C4
|
A:BE7303
|
3.2
|
8.5
|
0.6
|
HA
|
A:CYS206
|
3.3
|
9.4
|
0.2
|
HA
|
A:PRO138
|
3.3
|
10.9
|
1.0
|
CB
|
A:CYS206
|
3.4
|
7.4
|
0.8
|
C
|
A:GLN137
|
3.4
|
8.0
|
1.0
|
C
|
A:GLU205
|
3.4
|
6.4
|
1.0
|
CA
|
A:CYS206
|
3.5
|
5.8
|
0.8
|
CA
|
A:CYS206
|
3.5
|
7.8
|
0.2
|
HB3
|
A:CYS206
|
3.5
|
8.9
|
0.8
|
N
|
A:CYS206
|
3.7
|
6.9
|
0.2
|
N
|
A:CYS206
|
3.7
|
5.5
|
0.8
|
H
|
A:GLN137
|
3.7
|
10.6
|
0.6
|
O
|
A:HOH529
|
3.7
|
15.5
|
1.0
|
HB2
|
A:CYS206
|
3.8
|
12.6
|
0.2
|
H
|
A:GLN137
|
3.8
|
10.6
|
0.4
|
N
|
A:GLN137
|
3.8
|
8.8
|
1.0
|
N
|
A:PRO138
|
3.9
|
8.0
|
1.0
|
H
|
A:GLU205
|
4.0
|
7.8
|
1.0
|
HG
|
A:CYS206
|
4.0
|
16.2
|
0.2
|
CA
|
A:PRO138
|
4.1
|
9.1
|
1.0
|
SG
|
A:CYS206
|
4.1
|
13.5
|
0.2
|
C
|
A:GLN136
|
4.1
|
9.6
|
0.4
|
CA
|
A:GLN137
|
4.1
|
7.9
|
1.0
|
HB3
|
A:LEU204
|
4.2
|
9.7
|
1.0
|
HB2
|
A:CYS206
|
4.2
|
8.9
|
0.8
|
N
|
A:GLU205
|
4.2
|
6.5
|
1.0
|
C
|
A:GLN136
|
4.3
|
9.8
|
0.6
|
HA
|
A:GLN136
|
4.3
|
11.8
|
0.6
|
O
|
A:VAL135
|
4.3
|
12.3
|
1.0
|
H
|
A:CYS206
|
4.3
|
8.3
|
0.2
|
CA
|
A:GLU205
|
4.4
|
6.8
|
1.0
|
H
|
A:CYS206
|
4.4
|
6.7
|
0.8
|
C7
|
A:BE7303
|
4.4
|
9.4
|
0.6
|
HA
|
A:GLN137
|
4.4
|
9.5
|
1.0
|
C3
|
A:BE7303
|
4.5
|
8.4
|
0.6
|
O
|
A:GLN136
|
4.5
|
10.4
|
0.4
|
HA
|
A:GLN136
|
4.5
|
12.6
|
0.4
|
HB2
|
A:GLU205
|
4.5
|
8.9
|
1.0
|
C
|
A:VAL135
|
4.6
|
9.9
|
1.0
|
CA
|
A:GLN136
|
4.7
|
9.8
|
0.6
|
CA
|
A:GLN136
|
4.8
|
10.5
|
0.4
|
HA
|
A:VAL135
|
4.8
|
12.0
|
1.0
|
HD3
|
A:PRO138
|
4.8
|
11.4
|
1.0
|
O
|
A:GLN136
|
4.8
|
10.4
|
0.6
|
C
|
A:PRO138
|
4.9
|
8.3
|
1.0
|
CD
|
A:PRO138
|
4.9
|
9.5
|
1.0
|
N
|
A:GLN136
|
4.9
|
9.7
|
0.6
|
N
|
A:GLN136
|
5.0
|
10.2
|
0.4
|
C2
|
A:BE7303
|
5.0
|
8.9
|
0.6
|
CB
|
A:GLU205
|
5.0
|
7.4
|
1.0
|
C
|
A:LEU204
|
5.0
|
5.9
|
1.0
|
C
|
A:CYS206
|
5.0
|
5.9
|
0.8
|
|
Reference:
S.Gloeckner,
K.Ngo,
A.Heine,
G.Klebe.
Human Carbonic Anhydrase II in Complex with Aliphatically Substituted Benzenesulfonamide To Be Published.
Page generated: Sun Aug 11 08:17:39 2024
|