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Mercury in PDB 6x15: Inward-Facing State of the Glutamate Transporter Homologue Gltph in Complex with L-Aspartate and Sodium Ions

Other elements in 6x15:

The structure of Inward-Facing State of the Glutamate Transporter Homologue Gltph in Complex with L-Aspartate and Sodium Ions also contains other interesting chemical elements:

Sodium (Na) 9 atoms

Mercury Binding Sites:

The binding sites of Mercury atom in the Inward-Facing State of the Glutamate Transporter Homologue Gltph in Complex with L-Aspartate and Sodium Ions (pdb code 6x15). This binding sites where shown within 5.0 Angstroms radius around Mercury atom.
In total 3 binding sites of Mercury where determined in the Inward-Facing State of the Glutamate Transporter Homologue Gltph in Complex with L-Aspartate and Sodium Ions, PDB code: 6x15:
Jump to Mercury binding site number: 1; 2; 3;

Mercury binding site 1 out of 3 in 6x15

Go back to Mercury Binding Sites List in 6x15
Mercury binding site 1 out of 3 in the Inward-Facing State of the Glutamate Transporter Homologue Gltph in Complex with L-Aspartate and Sodium Ions


Mono view


Stereo pair view

A full contact list of Mercury with other atoms in the Hg binding site number 1 of Inward-Facing State of the Glutamate Transporter Homologue Gltph in Complex with L-Aspartate and Sodium Ions within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Hg505

b:54.4
occ:0.30
OH A:TYR383 2.5 37.8 1.0
SG A:CYS364 2.8 37.8 1.0
CZ A:TYR383 3.3 37.8 1.0
SG A:CYS55 3.3 34.4 1.0
CE2 A:TYR383 3.4 37.8 1.0
CB A:LEU54 3.5 32.7 1.0
C A:LEU54 3.6 32.7 1.0
N A:CYS55 3.7 34.4 1.0
O A:LEU54 3.7 32.7 1.0
O A:ALA360 3.8 33.7 1.0
CA A:CYS55 3.9 34.4 1.0
CA A:LEU54 4.2 32.7 1.0
CB A:CYS55 4.3 34.4 1.0
CA A:ILE361 4.3 33.3 1.0
CE1 A:TYR383 4.4 37.8 1.0
O A:VAL51 4.4 33.6 1.0
CB A:CYS364 4.5 37.8 1.0
O A:ILE361 4.6 33.3 1.0
C A:ALA360 4.7 33.7 1.0
CD2 A:TYR383 4.7 37.8 1.0
CD1 A:LEU54 4.7 32.7 1.0
CG A:LEU54 4.7 32.7 1.0
CD2 A:LEU374 4.8 45.0 1.0
CG2 A:VAL58 4.9 30.7 1.0
N A:ILE361 4.9 33.3 1.0
C A:ILE361 5.0 33.3 1.0

Mercury binding site 2 out of 3 in 6x15

Go back to Mercury Binding Sites List in 6x15
Mercury binding site 2 out of 3 in the Inward-Facing State of the Glutamate Transporter Homologue Gltph in Complex with L-Aspartate and Sodium Ions


Mono view


Stereo pair view

A full contact list of Mercury with other atoms in the Hg binding site number 2 of Inward-Facing State of the Glutamate Transporter Homologue Gltph in Complex with L-Aspartate and Sodium Ions within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Hg506

b:54.4
occ:0.30
OH B:TYR383 2.5 37.8 1.0
SG B:CYS364 2.8 37.8 1.0
CZ B:TYR383 3.3 37.8 1.0
SG B:CYS55 3.3 34.4 1.0
CE2 B:TYR383 3.4 37.8 1.0
CB B:LEU54 3.5 32.7 1.0
C B:LEU54 3.6 32.7 1.0
N B:CYS55 3.7 34.4 1.0
O B:LEU54 3.7 32.7 1.0
O B:ALA360 3.8 33.7 1.0
CA B:CYS55 3.9 34.4 1.0
CA B:LEU54 4.2 32.7 1.0
CB B:CYS55 4.3 34.4 1.0
CA B:ILE361 4.3 33.3 1.0
CE1 B:TYR383 4.4 37.8 1.0
O B:VAL51 4.4 33.6 1.0
CB B:CYS364 4.5 37.8 1.0
O B:ILE361 4.6 33.3 1.0
C B:ALA360 4.7 33.7 1.0
CD2 B:TYR383 4.7 37.8 1.0
CD1 B:LEU54 4.7 32.7 1.0
CG B:LEU54 4.7 32.7 1.0
CD2 B:LEU374 4.8 45.0 1.0
CG2 B:VAL58 4.9 30.7 1.0
N B:ILE361 4.9 33.3 1.0
C B:ILE361 5.0 33.3 1.0

Mercury binding site 3 out of 3 in 6x15

Go back to Mercury Binding Sites List in 6x15
Mercury binding site 3 out of 3 in the Inward-Facing State of the Glutamate Transporter Homologue Gltph in Complex with L-Aspartate and Sodium Ions


Mono view


Stereo pair view

A full contact list of Mercury with other atoms in the Hg binding site number 3 of Inward-Facing State of the Glutamate Transporter Homologue Gltph in Complex with L-Aspartate and Sodium Ions within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Hg506

b:54.4
occ:0.30
OH C:TYR383 2.5 37.8 1.0
SG C:CYS364 2.8 37.8 1.0
CZ C:TYR383 3.3 37.8 1.0
SG C:CYS55 3.3 34.4 1.0
CE2 C:TYR383 3.4 37.8 1.0
CB C:LEU54 3.5 32.7 1.0
C C:LEU54 3.6 32.7 1.0
N C:CYS55 3.7 34.4 1.0
O C:LEU54 3.7 32.7 1.0
O C:ALA360 3.8 33.7 1.0
CA C:CYS55 3.9 34.4 1.0
CA C:LEU54 4.2 32.7 1.0
CB C:CYS55 4.3 34.4 1.0
CA C:ILE361 4.3 33.3 1.0
CE1 C:TYR383 4.4 37.8 1.0
O C:VAL51 4.4 33.6 1.0
CB C:CYS364 4.5 37.8 1.0
O C:ILE361 4.6 33.3 1.0
C C:ALA360 4.7 33.7 1.0
CD2 C:TYR383 4.7 37.8 1.0
CD1 C:LEU54 4.7 32.7 1.0
CG C:LEU54 4.7 32.7 1.0
CD2 C:LEU374 4.8 45.0 1.0
CG2 C:VAL58 4.9 30.7 1.0
N C:ILE361 4.9 33.3 1.0
C C:ILE361 5.0 33.3 1.0

Reference:

X.Wang, O.Boudker. Large Domain Movements Through the Lipid Bilayer Mediate Substrate Release and Inhibition of Glutamate Transporters. Elife V. 9 2020.
ISSN: ESSN 2050-084X
PubMed: 33155546
DOI: 10.7554/ELIFE.58417
Page generated: Sun Dec 13 19:18:28 2020

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