Mercury in PDB 7tg7: [T:Ag+/HG2+:T--(PH11-PH7; 60S in Metals)] Metal-Mediated Dna Base Pair in Tensegrity Triangle Grown at pH 11 and Soaked in pH 7 with Ag+ and HG2+ For 60S

The structure of [T:Ag+/HG2+:T--(PH11-PH7; 60S in Metals)] Metal-Mediated Dna Base Pair in Tensegrity Triangle Grown at pH 11 and Soaked in pH 7 with Ag+ and HG2+ For 60S, PDB code: 7tg7 was solved by B.Lu, S.Vecchioni, N.C.Seeman, R.Sha, Y.P.Ohayon, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	32.79 / 3.94
Space group	H 3
Cell size a, b, c (Å), α, β, γ (°)	105.949, 105.949, 93.791, 90, 90, 120
R / Rfree (%)	20 / 23.7

The binding sites of Mercury atom in the [T:Ag+/HG2+:T--(PH11-PH7; 60S in Metals)] Metal-Mediated Dna Base Pair in Tensegrity Triangle Grown at pH 11 and Soaked in pH 7 with Ag+ and HG2+ For 60S (pdb code 7tg7). This binding sites where shown within 5.0 Angstroms radius around Mercury atom.
In total 2 binding sites of Mercury where determined in the [T:Ag+/HG2+:T--(PH11-PH7; 60S in Metals)] Metal-Mediated Dna Base Pair in Tensegrity Triangle Grown at pH 11 and Soaked in pH 7 with Ag+ and HG2+ For 60S, PDB code: 7tg7:
Jump to Mercury binding site number: 1; 2;

Mercury binding site 1 out of 2 in the [T:Ag+/HG2+:T--(PH11-PH7; 60S in Metals)] Metal-Mediated Dna Base Pair in Tensegrity Triangle Grown at pH 11 and Soaked in pH 7 with Ag+ and HG2+ For 60S


Mono view


Stereo pair view

A full contact list of Mercury with other atoms in the Hg binding site number 1 of [T:Ag+/HG2+:T--(PH11-PH7; 60S in Metals)] Metal-Mediated Dna Base Pair in Tensegrity Triangle Grown at pH 11 and Soaked in pH 7 with Ag+ and HG2+ For 60S within 5.0Å range: probe atom residue distance (Å) B Occ B:Hg101 b:135.8 occ:0.61 N3 B:DT4 2.2 217.7 1.0 N3 A:DT12 2.6 157.3 1.0 O4 A:DT12 2.6 160.5 1.0 O4 B:DT4 2.7 186.0 1.0 C4 B:DT4 2.8 194.2 1.0 C4 A:DT12 3.0 158.2 1.0 N1 B:DA3 3.1 164.7 1.0 C2 B:DT4 3.3 226.7 1.0 C6 B:DA3 3.4 161.3 1.0 O2 B:DT4 3.6 246.0 1.0 N6 B:DA3 3.6 158.5 1.0 C2 B:DA3 3.7 167.8 1.0 N1 B:DA5 3.7 246.4 1.0 C2 B:DA5 3.8 260.1 1.0 C2 A:DT12 3.8 154.8 1.0 N3 A:DT13 3.8 147.8 1.0 C6 B:DA5 4.1 224.8 1.0 O2 A:DT12 4.1 154.3 1.0 N3 B:DA5 4.2 211.9 1.0 HG B:HG102 4.2 152.0 0.2 C5 B:DA3 4.2 161.4 1.0 C5 B:DT4 4.2 183.3 1.0 C4 A:DT13 4.3 147.0 1.0 O4 A:DT13 4.3 148.7 1.0 C5 A:DT12 4.4 156.3 1.0 C4 B:DA5 4.4 211.9 1.0 C5 B:DA5 4.4 216.7 1.0 C2 A:DT13 4.4 146.2 1.0 N3 B:DA3 4.5 168.2 1.0 N1 B:DT4 4.5 207.2 1.0 O4 A:DT11 4.5 160.3 1.0 O2 A:DT13 4.6 147.2 1.0 C4 B:DA3 4.6 164.9 1.0 N6 B:DA5 4.7 226.9 1.0 C6 B:DT4 4.8 179.6 1.0 N1 A:DT12 4.9 153.0 1.0 N3 A:DT11 4.9 163.0 1.0 C4 A:DT11 5.0 170.6 1.0

Mercury binding site 2 out of 2 in the [T:Ag+/HG2+:T--(PH11-PH7; 60S in Metals)] Metal-Mediated Dna Base Pair in Tensegrity Triangle Grown at pH 11 and Soaked in pH 7 with Ag+ and HG2+ For 60S


Mono view


Stereo pair view

A full contact list of Mercury with other atoms in the Hg binding site number 2 of [T:Ag+/HG2+:T--(PH11-PH7; 60S in Metals)] Metal-Mediated Dna Base Pair in Tensegrity Triangle Grown at pH 11 and Soaked in pH 7 with Ag+ and HG2+ For 60S within 5.0Å range: probe atom residue distance (Å) B Occ B:Hg102 b:152.0 occ:0.18 O4 B:DT4 2.3 186.0 1.0 N6 B:DA3 3.4 158.5 1.0 C4 B:DT4 3.5 194.2 1.0 O4 A:DT12 3.7 160.5 1.0 N7 B:DA3 3.8 158.9 1.0 C6 B:DA3 3.9 161.3 1.0 C7 B:DT4 4.0 158.5 1.0 C5 B:DA3 4.1 161.4 1.0 O4 A:DT11 4.1 160.3 1.0 HG B:HG101 4.2 135.8 0.6 C5 B:DT4 4.3 183.3 1.0 N6 B:DA5 4.5 226.9 1.0 N3 B:DT4 4.6 217.7 1.0 C7 A:DT11 4.8 199.9 1.0 C8 B:DA3 4.8 160.9 1.0 C4 A:DT11 4.9 170.6 1.0 C4 A:DT12 5.0 158.2 1.0 N1 B:DA3 5.0 164.7 1.0

B.Lu, Y.P.Ohayon, R.Sha, K.Woloszyn, L.Rothschild, S.Wind, W.Hendrickson, C.Mao, N.C.Seeman, S.Vecchioni. Crystallographic pH Titration of Silver and Mercury Mediated Dna Base Pairs To Be Published.