Mercury in PDB 7tg8: [T:Ag+/HG2+:T--(PH11-PH7; 90S in Metals)] Metal-Mediated Dna Base Pair in Tensegrity Triangle Grown at pH 11 and Soaked in pH 7 with Ag+ and HG2+ For 90S

The structure of [T:Ag+/HG2+:T--(PH11-PH7; 90S in Metals)] Metal-Mediated Dna Base Pair in Tensegrity Triangle Grown at pH 11 and Soaked in pH 7 with Ag+ and HG2+ For 90S, PDB code: 7tg8 was solved by B.Lu, S.Vecchioni, N.C.Seeman, R.Sha, Y.P.Ohayon, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	32.56 / 5.46
Space group	H 3
Cell size a, b, c (Å), α, β, γ (°)	107.135, 107.135, 87.672, 90, 90, 120
R / Rfree (%)	24.8 / 29.3

The binding sites of Mercury atom in the [T:Ag+/HG2+:T--(PH11-PH7; 90S in Metals)] Metal-Mediated Dna Base Pair in Tensegrity Triangle Grown at pH 11 and Soaked in pH 7 with Ag+ and HG2+ For 90S (pdb code 7tg8). This binding sites where shown within 5.0 Angstroms radius around Mercury atom.
In total 2 binding sites of Mercury where determined in the [T:Ag+/HG2+:T--(PH11-PH7; 90S in Metals)] Metal-Mediated Dna Base Pair in Tensegrity Triangle Grown at pH 11 and Soaked in pH 7 with Ag+ and HG2+ For 90S, PDB code: 7tg8:
Jump to Mercury binding site number: 1; 2;

Mercury binding site 1 out of 2 in the [T:Ag+/HG2+:T--(PH11-PH7; 90S in Metals)] Metal-Mediated Dna Base Pair in Tensegrity Triangle Grown at pH 11 and Soaked in pH 7 with Ag+ and HG2+ For 90S


Mono view


Stereo pair view

A full contact list of Mercury with other atoms in the Hg binding site number 1 of [T:Ag+/HG2+:T--(PH11-PH7; 90S in Metals)] Metal-Mediated Dna Base Pair in Tensegrity Triangle Grown at pH 11 and Soaked in pH 7 with Ag+ and HG2+ For 90S within 5.0Å range: probe atom residue distance (Å) B Occ B:Hg101 b:112.4 occ:0.77 N3 B:DT4 2.5 266.6 1.0 N3 A:DT12 2.6 306.4 1.0 O4 A:DT12 2.7 305.3 1.0 C4 A:DT12 3.0 304.4 1.0 O2 B:DT4 3.3 291.1 1.0 C2 B:DT4 3.4 272.6 1.0 C4 B:DT4 3.4 244.1 1.0 O4 B:DT4 3.4 238.3 1.0 N1 B:DA3 3.6 219.7 1.0 C2 B:DA5 3.7 293.2 1.0 C2 A:DT12 3.7 305.9 1.0 N3 A:DT13 3.9 160.2 1.0 N1 B:DA5 3.9 280.2 1.0 N3 B:DA5 3.9 242.3 1.0 O2 A:DT12 4.0 308.1 1.0 C6 B:DA3 4.0 217.4 1.0 C2 B:DA3 4.1 220.0 1.0 N6 B:DA3 4.2 217.2 1.0 C4 B:DA5 4.3 240.2 1.0 C2 A:DT13 4.3 161.9 1.0 C6 B:DA5 4.3 256.4 1.0 O2 A:DT13 4.4 164.9 1.0 C4 A:DT13 4.4 157.0 1.0 C5 A:DT12 4.5 301.5 1.0 C5 B:DA5 4.5 245.4 1.0 HG B:HG102 4.6 285.6 0.2 O4 A:DT13 4.6 155.9 1.0 N1 B:DT4 4.7 251.0 1.0 C5 B:DT4 4.8 230.9 1.0 N1 A:DT12 4.9 303.0 1.0 C5 B:DA3 4.9 215.5 1.0 N3 B:DA3 4.9 218.2 1.0

Mercury binding site 2 out of 2 in the [T:Ag+/HG2+:T--(PH11-PH7; 90S in Metals)] Metal-Mediated Dna Base Pair in Tensegrity Triangle Grown at pH 11 and Soaked in pH 7 with Ag+ and HG2+ For 90S


Mono view


Stereo pair view

A full contact list of Mercury with other atoms in the Hg binding site number 2 of [T:Ag+/HG2+:T--(PH11-PH7; 90S in Metals)] Metal-Mediated Dna Base Pair in Tensegrity Triangle Grown at pH 11 and Soaked in pH 7 with Ag+ and HG2+ For 90S within 5.0Å range: probe atom residue distance (Å) B Occ B:Hg102 b:285.6 occ:0.22 O4 B:DT4 2.9 238.3 1.0 N6 B:DA3 3.1 217.2 1.0 O4 A:DT12 3.1 305.3 1.0 O4 A:DT11 3.8 175.5 1.0 C6 B:DA3 4.0 217.4 1.0 C4 B:DT4 4.1 244.1 1.0 C4 A:DT11 4.2 185.6 1.0 C4 A:DT12 4.3 304.4 1.0 N7 B:DA3 4.4 213.1 1.0 C5 B:DA3 4.4 215.5 1.0 C7 A:DT11 4.6 211.6 1.0 HG B:HG101 4.6 112.4 0.8 C7 A:DT12 4.6 300.7 1.0 C5 A:DT11 4.6 210.4 1.0 O4 A:DT13 4.7 155.9 1.0 N3 B:DT4 4.8 266.6 1.0 N1 B:DA3 4.9 219.7 1.0 C5 A:DT12 5.0 301.5 1.0 N3 A:DT11 5.0 180.8 1.0

B.Lu, Y.P.Ohayon, R.Sha, K.Woloszyn, L.Rothschild, S.Wind, W.Hendrickson, C.Mao, N.C.Seeman, S.Vecchioni. Crystallographic pH Titration of Silver and Mercury Mediated Dna Base Pairs To Be Published.