Mercury in PDB 8wgl: Crystal Structure of Rhodothermus Marinus Substrate-Binding Protein (Hg Soaking)

The structure of Crystal Structure of Rhodothermus Marinus Substrate-Binding Protein (Hg Soaking), PDB code: 8wgl was solved by K.H.Nam, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	24.11 / 2.30
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	49.645, 45.209, 57.041, 90, 91.72, 90
R / Rfree (%)	19.2 / 25

The binding sites of Mercury atom in the Crystal Structure of Rhodothermus Marinus Substrate-Binding Protein (Hg Soaking) (pdb code 8wgl). This binding sites where shown within 5.0 Angstroms radius around Mercury atom.
In total 2 binding sites of Mercury where determined in the Crystal Structure of Rhodothermus Marinus Substrate-Binding Protein (Hg Soaking), PDB code: 8wgl:
Jump to Mercury binding site number: 1; 2;

Mercury binding site 1 out of 2 in the Crystal Structure of Rhodothermus Marinus Substrate-Binding Protein (Hg Soaking)


Mono view


Stereo pair view

A full contact list of Mercury with other atoms in the Hg binding site number 1 of Crystal Structure of Rhodothermus Marinus Substrate-Binding Protein (Hg Soaking) within 5.0Å range: probe atom residue distance (Å) B Occ A:Hg201 b:37.9 occ:0.35 O A:HOH323 2.2 19.1 1.0 SG A:CYS145 2.6 33.1 1.0 CE A:MET167 3.4 48.7 1.0 O A:GLY143 3.4 33.2 1.0 N A:VAL132 3.6 23.2 1.0 CG1 A:VAL163 3.7 27.4 1.0 N A:CYS145 3.7 23.4 1.0 CB A:CYS145 3.7 23.2 1.0 O A:MET130 3.8 26.4 1.0 CA A:PRO131 3.8 32.3 1.0 C A:ALA144 4.0 25.2 1.0 CA A:ALA144 4.0 26.6 1.0 CG2 A:VAL132 4.0 22.0 1.0 C A:PRO131 4.1 30.6 1.0 CA A:CYS145 4.1 27.7 1.0 CB A:VAL132 4.3 23.3 1.0 C A:GLY143 4.5 22.8 1.0 CA A:VAL132 4.5 20.3 1.0 C A:MET130 4.7 34.9 1.0 N A:PRO131 4.7 30.2 1.0 OG1 A:THR126 4.8 20.8 1.0 N A:ALA144 4.8 21.4 1.0 O A:ALA144 4.8 30.0 1.0 CB A:PRO131 4.8 25.2 1.0 SD A:MET167 4.8 53.9 1.0 CG A:MET167 4.8 47.5 1.0 O A:VAL132 4.9 23.0 1.0 O A:HOH313 5.0 29.2 1.0 CB A:VAL163 5.0 28.3 1.0

Mercury binding site 2 out of 2 in the Crystal Structure of Rhodothermus Marinus Substrate-Binding Protein (Hg Soaking)


Mono view


Stereo pair view

A full contact list of Mercury with other atoms in the Hg binding site number 2 of Crystal Structure of Rhodothermus Marinus Substrate-Binding Protein (Hg Soaking) within 5.0Å range: probe atom residue distance (Å) B Occ B:Hg201 b:42.1 occ:0.26 O B:HOH308 2.3 28.6 1.0 SG B:CYS145 2.6 61.1 1.0 N B:VAL132 3.4 26.5 1.0 CG1 B:VAL163 3.4 31.3 1.0 O B:GLY143 3.4 26.9 1.0 N B:CYS145 3.6 27.3 1.0 CA B:PRO131 3.8 26.4 1.0 CG2 B:VAL132 3.9 21.6 1.0 CA B:ALA144 3.9 31.3 1.0 O B:MET130 3.9 25.9 1.0 CB B:VAL132 4.0 27.7 1.0 O B:HOH313 4.0 32.1 1.0 CB B:CYS145 4.0 28.0 1.0 C B:ALA144 4.0 26.8 1.0 C B:PRO131 4.0 25.4 1.0 CA B:VAL132 4.2 26.8 1.0 CA B:CYS145 4.3 30.6 1.0 C B:GLY143 4.4 32.0 1.0 OG1 B:THR126 4.4 31.5 1.0 CG B:MET167 4.5 38.2 1.0 N B:ALA144 4.7 27.5 1.0 O B:VAL132 4.7 26.7 1.0 CB B:VAL163 4.8 34.1 1.0 CB B:PRO131 4.8 26.1 1.0 N B:PRO131 4.8 28.0 1.0 C B:MET130 4.8 27.6 1.0 CE B:MET167 4.9 30.4 1.0 O B:ALA144 4.9 32.5 1.0

K.H.Nam, K.H.Nam. N/A N/A.