Mercury in PDB 7sd7: [C:HG2+:T] Metal-Mediated Dna Base Pair in A Self-Assembling Rhombohedral Lattice

The structure of [C:HG2+:T] Metal-Mediated Dna Base Pair in A Self-Assembling Rhombohedral Lattice, PDB code: 7sd7 was solved by S.Vecchioni, B.Lu, N.C.Seeman, R.Sha, Y.P.Ohayon, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	32.22 / 3.68
Space group	H 3
Cell size a, b, c (Å), α, β, γ (°)	105.587, 105.587, 89.084, 90, 90, 120
R / Rfree (%)	22.3 / 27.5

The binding sites of Mercury atom in the [C:HG2+:T] Metal-Mediated Dna Base Pair in A Self-Assembling Rhombohedral Lattice (pdb code 7sd7). This binding sites where shown within 5.0 Angstroms radius around Mercury atom.
In total only one binding site of Mercury was determined in the [C:HG2+:T] Metal-Mediated Dna Base Pair in A Self-Assembling Rhombohedral Lattice, PDB code: 7sd7:

Mercury binding site 1 out of 1 in the [C:HG2+:T] Metal-Mediated Dna Base Pair in A Self-Assembling Rhombohedral Lattice


Mono view


Stereo pair view

A full contact list of Mercury with other atoms in the Hg binding site number 1 of [C:HG2+:T] Metal-Mediated Dna Base Pair in A Self-Assembling Rhombohedral Lattice within 5.0Å range: probe atom residue distance (Å) B Occ B:Hg201 b:265.2 occ:1.00 N3 B:DT122 2.1 260.1 1.0 N3 A:DC112 2.1 285.2 1.0 N4 A:DC112 2.7 277.7 1.0 C4 A:DC112 2.8 274.3 1.0 C4 B:DT122 2.9 268.9 1.0 O4 B:DT122 3.0 262.5 1.0 C2 B:DT122 3.0 261.1 1.0 O2 B:DT122 3.2 253.5 1.0 C2 A:DC112 3.2 279.4 1.0 N6 B:DA121 3.4 261.7 1.0 O2 A:DC112 3.5 286.8 1.0 C6 B:DA121 3.7 266.3 1.0 O4 A:DT111 3.7 306.9 1.0 N1 B:DA121 4.2 261.8 1.0 C5 A:DC112 4.2 260.1 1.0 C4 A:DT111 4.2 294.1 1.0 C5 B:DA121 4.2 275.9 1.0 C5 B:DT122 4.3 284.1 1.0 N1 B:DT122 4.3 272.8 1.0 N1 B:DA123 4.3 280.1 1.0 N1 A:DC112 4.4 260.6 1.0 O4 A:DT113 4.4 269.7 1.0 N3 A:DT111 4.5 286.5 1.0 N6 B:DA123 4.5 291.7 1.0 C6 B:DA123 4.6 287.4 1.0 N7 B:DA121 4.6 280.9 1.0 C6 B:DT122 4.7 285.1 1.0 C6 A:DC112 4.8 254.1 1.0 N3 A:DT113 4.9 279.3 1.0 C4 A:DT113 4.9 266.2 1.0 C2 B:DA121 4.9 266.6 1.0 C2 B:DA123 4.9 275.3 1.0

S.Vecchioni, B.Lu, R.Sha, Y.P.Ohayon, J.Yoder, K.Woloszyn, W.Bernfeld, W.Hendrickson, L.Rothschild, C.Mao, S.Wind, N.C.Seeman. Metal-Mediated Dna Nanotechnology in 3D: Reengineering the Semantomorphic Alphabet To Be Published.