Mercury in PDB 7tgb: [T:Ag+/HG2+:T--(PH8.5-PH11; 60S in Metals)] Metal-Mediated Dna Base Pair in Tensegrity Triangle Grown at pH 8.5 and Soaked in pH 11 with Ag+ and HG2+ For 60S

The structure of [T:Ag+/HG2+:T--(PH8.5-PH11; 60S in Metals)] Metal-Mediated Dna Base Pair in Tensegrity Triangle Grown at pH 8.5 and Soaked in pH 11 with Ag+ and HG2+ For 60S, PDB code: 7tgb was solved by B.Lu, S.Vecchioni, N.C.Seeman, R.Sha, Y.P.Ohayon, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	41.02 / 5.36
Space group	H 3
Cell size a, b, c (Å), α, β, γ (°)	105.898, 105.898, 91.73, 90, 90, 120
R / Rfree (%)	15.1 / 18.6

The binding sites of Mercury atom in the [T:Ag+/HG2+:T--(PH8.5-PH11; 60S in Metals)] Metal-Mediated Dna Base Pair in Tensegrity Triangle Grown at pH 8.5 and Soaked in pH 11 with Ag+ and HG2+ For 60S (pdb code 7tgb). This binding sites where shown within 5.0 Angstroms radius around Mercury atom.
In total 2 binding sites of Mercury where determined in the [T:Ag+/HG2+:T--(PH8.5-PH11; 60S in Metals)] Metal-Mediated Dna Base Pair in Tensegrity Triangle Grown at pH 8.5 and Soaked in pH 11 with Ag+ and HG2+ For 60S, PDB code: 7tgb:
Jump to Mercury binding site number: 1; 2;

Mercury binding site 1 out of 2 in the [T:Ag+/HG2+:T--(PH8.5-PH11; 60S in Metals)] Metal-Mediated Dna Base Pair in Tensegrity Triangle Grown at pH 8.5 and Soaked in pH 11 with Ag+ and HG2+ For 60S


Mono view


Stereo pair view

A full contact list of Mercury with other atoms in the Hg binding site number 1 of [T:Ag+/HG2+:T--(PH8.5-PH11; 60S in Metals)] Metal-Mediated Dna Base Pair in Tensegrity Triangle Grown at pH 8.5 and Soaked in pH 11 with Ag+ and HG2+ For 60S within 5.0Å range: probe atom residue distance (Å) B Occ B:Hg101 b:140.1 occ:0.60 N3 B:DT4 2.5 308.9 1.0 N3 A:DT12 2.6 214.7 1.0 O4 A:DT12 2.8 218.8 1.0 N3 A:DT13 2.8 221.5 1.0 C2 B:DA5 2.9 357.9 1.0 C4 A:DT12 3.1 214.0 1.0 O4 B:DT4 3.1 277.6 1.0 N1 B:DA5 3.1 345.1 1.0 N3 B:DA5 3.2 309.1 1.0 C4 B:DT4 3.2 285.8 1.0 C4 A:DT13 3.3 217.1 1.0 O4 A:DT13 3.4 218.4 1.0 C2 B:DT4 3.5 317.9 1.0 C4 B:DA5 3.6 309.4 1.0 C6 B:DA5 3.6 323.7 1.0 C2 A:DT13 3.6 220.8 1.0 O2 B:DT4 3.6 336.9 1.0 C2 A:DT12 3.7 210.2 1.0 N1 B:DA3 3.8 268.1 1.0 C5 B:DA5 3.8 315.0 1.0 O2 A:DT13 3.9 225.2 1.0 O2 A:DT12 4.0 212.0 1.0 N6 B:DA3 4.1 261.6 1.0 C6 B:DA3 4.1 264.7 1.0 HG B:HG102 4.2 124.3 0.2 C5 A:DT13 4.4 211.2 1.0 N6 B:DA5 4.4 326.6 1.0 C5 A:DT12 4.4 207.6 1.0 C2 B:DA3 4.5 271.5 1.0 N9 B:DA5 4.5 328.6 1.0 N1 A:DT13 4.5 215.2 1.0 C5 B:DT4 4.6 275.3 1.0 N1 B:DT4 4.7 298.8 1.0 N7 B:DA5 4.8 313.4 1.0 C6 A:DT13 4.8 210.6 1.0 N1 A:DT12 4.9 204.0 1.0

Mercury binding site 2 out of 2 in the [T:Ag+/HG2+:T--(PH8.5-PH11; 60S in Metals)] Metal-Mediated Dna Base Pair in Tensegrity Triangle Grown at pH 8.5 and Soaked in pH 11 with Ag+ and HG2+ For 60S


Mono view


Stereo pair view

A full contact list of Mercury with other atoms in the Hg binding site number 2 of [T:Ag+/HG2+:T--(PH8.5-PH11; 60S in Metals)] Metal-Mediated Dna Base Pair in Tensegrity Triangle Grown at pH 8.5 and Soaked in pH 11 with Ag+ and HG2+ For 60S within 5.0Å range: probe atom residue distance (Å) B Occ B:Hg102 b:124.3 occ:0.22 O4 B:DT4 3.0 277.6 1.0 N6 B:DA3 3.3 261.6 1.0 O4 A:DT12 3.5 218.8 1.0 O4 A:DT11 4.1 263.5 1.0 C4 B:DT4 4.1 285.8 1.0 HG B:HG101 4.2 140.1 0.6 C6 B:DA3 4.3 264.7 1.0 N6 B:DA5 4.4 326.6 1.0 O4 A:DT13 4.4 218.4 1.0 N1 B:DA5 4.5 345.1 1.0 C4 A:DT12 4.6 214.0 1.0 N7 B:DA3 4.8 262.5 1.0 C4 A:DT11 4.8 269.1 1.0 C6 B:DA5 4.8 323.7 1.0 C5 B:DA3 4.8 265.0 1.0 N3 B:DT4 4.9 308.9 1.0

B.Lu, Y.P.Ohayon, R.Sha, K.Woloszyn, L.Rothschild, S.Wind, W.Hendrickson, C.Mao, N.C.Seeman, S.Vecchioni. Crystallographic pH Titration of Silver and Mercury Mediated Dna Base Pairs To Be Published.