Mercury in PDB 8j1m: Crystal Structure of A Crosslinked Variant of Bbzip

The structure of Crystal Structure of A Crosslinked Variant of Bbzip, PDB code: 8j1m was solved by T.Zhang, Y.Zhang, D.Sui, J.Hu, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	30.44 / 1.95
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	116.407, 51.012, 51.817, 90, 113.92, 90
R / Rfree (%)	17.1 / 20

The structure of Crystal Structure of A Crosslinked Variant of Bbzip also contains other interesting chemical elements:

Chlorine	(Cl)	2 atoms
Cadmium	(Cd)	3 atoms

The binding sites of Mercury atom in the Crystal Structure of A Crosslinked Variant of Bbzip (pdb code 8j1m). This binding sites where shown within 5.0 Angstroms radius around Mercury atom.
In total only one binding site of Mercury was determined in the Crystal Structure of A Crosslinked Variant of Bbzip, PDB code: 8j1m:

Mercury binding site 1 out of 1 in the Crystal Structure of A Crosslinked Variant of Bbzip


Mono view


Stereo pair view

A full contact list of Mercury with other atoms in the Hg binding site number 1 of Crystal Structure of A Crosslinked Variant of Bbzip within 5.0Å range: probe atom residue distance (Å) B Occ A:Hg411 b:32.0 occ:0.38 SG A:CYS95 2.4 37.6 1.0 SG A:CYS214 2.5 46.8 1.0 O A:HOH519 2.9 32.2 1.0 O A:MET91 3.1 32.4 1.0 CB A:CYS95 3.4 35.0 1.0 CB A:CYS214 3.4 32.0 1.0 O A:PRO210 3.5 33.6 1.0 C A:MET91 3.7 37.7 1.0 CA A:GLU211 3.7 32.8 1.0 C A:PRO210 3.7 33.1 1.0 N A:GLU211 3.8 35.1 1.0 N A:LEU92 4.2 34.4 1.0 CA A:LEU92 4.2 40.0 1.0 CB A:PRO210 4.3 30.6 1.0 CB A:MET91 4.3 37.9 1.0 CD2 A:LEU92 4.5 41.2 1.0 CB A:GLU211 4.5 32.6 1.0 N A:CYS95 4.5 30.6 1.0 CA A:CYS95 4.5 34.8 1.0 O A:HOH537 4.6 36.8 1.0 CA A:MET91 4.6 34.2 1.0 CA A:PRO210 4.6 32.1 1.0 CA A:CYS214 4.7 28.6 1.0 C A:GLU211 4.7 26.7 1.0 N A:CYS214 4.8 33.9 1.0 O A:GLU211 4.9 31.1 1.0

Y.Zhang, M.Jafari, T.Zhang, D.Sui, L.Sagresti, K.M.Merz Jr., J.Hu. Molecular Insights Into Substrate Translocation in An Elevator-Type Metal Transporter. Biorxiv 2024.
ISSN: ISSN 2692-8205
PubMed: 39345646
DOI: 10.1101/2024.09.18.613805