Atomistry » Mercury » PDB 7ca2-9ca2 » 7d2w
Atomistry »
  Mercury »
    PDB 7ca2-9ca2 »
      7d2w »

Mercury in PDB 7d2w: Crystal Structure of Phit/Phista-Like Subfamily PF3D7_1372300 Protein From Plasmodium Falciparum

Protein crystallography data

The structure of Crystal Structure of Phit/Phista-Like Subfamily PF3D7_1372300 Protein From Plasmodium Falciparum, PDB code: 7d2w was solved by Y.Gao, B.L.Yang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 40.43 / 1.97
Space group P 65
Cell size a, b, c (Å), α, β, γ (°) 78.523, 78.523, 100.559, 90, 90, 120
R / Rfree (%) 17.2 / 20.4

Mercury Binding Sites:

The binding sites of Mercury atom in the Crystal Structure of Phit/Phista-Like Subfamily PF3D7_1372300 Protein From Plasmodium Falciparum (pdb code 7d2w). This binding sites where shown within 5.0 Angstroms radius around Mercury atom.
In total only one binding site of Mercury was determined in the Crystal Structure of Phit/Phista-Like Subfamily PF3D7_1372300 Protein From Plasmodium Falciparum, PDB code: 7d2w:

Mercury binding site 1 out of 1 in 7d2w

Go back to Mercury Binding Sites List in 7d2w
Mercury binding site 1 out of 1 in the Crystal Structure of Phit/Phista-Like Subfamily PF3D7_1372300 Protein From Plasmodium Falciparum


Mono view


Stereo pair view

A full contact list of Mercury with other atoms in the Hg binding site number 1 of Crystal Structure of Phit/Phista-Like Subfamily PF3D7_1372300 Protein From Plasmodium Falciparum within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Hg202

b:82.0
occ:0.16
O B:HOH358 2.9 48.7 1.0
CD2 B:TYR170 3.6 47.0 1.0
CD A:LYS175 3.6 58.1 1.0
CE2 B:TYR170 3.7 50.8 1.0
CG B:TYR170 3.8 38.1 1.0
CZ B:TYR170 3.9 57.8 1.0
O B:HOH389 4.0 49.1 1.0
CD1 B:TYR170 4.0 46.5 1.0
CE1 B:TYR170 4.1 56.7 1.0
NZ A:LYS175 4.1 67.7 1.0
ND2 B:ASN88 4.2 49.6 1.0
CE A:LYS175 4.5 65.1 1.0
CB B:TYR170 4.6 31.3 1.0
OH B:TYR170 4.6 60.4 1.0
CG A:LYS175 4.7 52.2 1.0
O A:HOH267 4.7 50.3 1.0
CG B:ASN88 5.0 49.7 1.0

Reference:

B.L.Yang, Y.Gao. Structural Analysis of Binding Between Plasmodium Falciparum Phist and the Parasite Virulence Factor PFEMP1 Protein To Be Published.
Page generated: Fri Sep 24 14:31:34 2021

Last articles

Zn in 7VD8
Zn in 7V1R
Zn in 7V1Q
Zn in 7VPF
Zn in 7T85
Zn in 7T5F
Zn in 7NF9
Zn in 7M4M
Zn in 7M4O
Zn in 7M4N
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy