Mercury in PDB 7sdw: [T:HG2+:Mc] Metal-Mediated Dna Base Pair in A Self-Assembling Rhombohedral Lattice

The structure of [T:HG2+:Mc] Metal-Mediated Dna Base Pair in A Self-Assembling Rhombohedral Lattice, PDB code: 7sdw was solved by B.Lu, S.Vecchioni, N.C.Seeman, R.Sha, Y.P.Ohayon, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	32.83 / 4.20
Space group	H 3
Cell size a, b, c (Å), α, β, γ (°)	106.866, 106.866, 93.157, 90, 90, 120
R / Rfree (%)	18.8 / 21.8

The binding sites of Mercury atom in the [T:HG2+:Mc] Metal-Mediated Dna Base Pair in A Self-Assembling Rhombohedral Lattice (pdb code 7sdw). This binding sites where shown within 5.0 Angstroms radius around Mercury atom.
In total only one binding site of Mercury was determined in the [T:HG2+:Mc] Metal-Mediated Dna Base Pair in A Self-Assembling Rhombohedral Lattice, PDB code: 7sdw:

Mercury binding site 1 out of 1 in the [T:HG2+:Mc] Metal-Mediated Dna Base Pair in A Self-Assembling Rhombohedral Lattice


Mono view


Stereo pair view

A full contact list of Mercury with other atoms in the Hg binding site number 1 of [T:HG2+:Mc] Metal-Mediated Dna Base Pair in A Self-Assembling Rhombohedral Lattice within 5.0Å range: probe atom residue distance (Å) B Occ B:Hg101 b:131.1 occ:0.06 N4 B:5CM4 2.3 236.5 1.0 O4 A:DT12 2.8 263.7 1.0 N6 B:DA3 2.8 223.9 1.0 C6 B:DA3 3.6 235.9 1.0 C4 B:5CM4 3.7 248.8 1.0 C4 A:DT12 4.0 253.3 1.0 C5 B:DA3 4.1 241.9 1.0 O4 A:DT11 4.2 281.6 1.0 N7 B:DA3 4.2 238.1 1.0 O4 A:DT13 4.4 261.0 1.0 N3 B:5CM4 4.5 254.2 1.0 C5A B:5CM4 4.5 357.4 1.0 N1 B:DA3 4.5 242.3 1.0 C4 A:DT11 4.6 269.5 1.0 C5 B:5CM4 4.6 254.7 1.0 C7 A:DT12 4.7 234.6 1.0 C5 A:DT12 4.9 237.8 1.0 N3 A:DT12 4.9 254.8 1.0 C7 A:DT11 5.0 278.0 1.0 C5 A:DT11 5.0 270.4 1.0

S.Vecchioni, B.Lu, R.Sha, Y.P.Ohayon, J.Yoder, K.Woloszyn, W.Bernfeld, W.Hendrickson, L.Rothschild, C.Mao, S.Wind, N.C.Seeman. Metal-Mediated Dna Nanotechnology in 3D: Reengineering the Semantomorphic Alphabet To Be Published.