Mercury in PDB 7sdx: [U:HG2+:Mc] Metal-Mediated Dna Base Pair in A Self-Assembling Rhombohedral Lattice

The structure of [U:HG2+:Mc] Metal-Mediated Dna Base Pair in A Self-Assembling Rhombohedral Lattice, PDB code: 7sdx was solved by B.Lu, S.Vecchioni, N.C.Seeman, R.Sha, Y.P.Ohayon, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	32.55 / 3.89
Space group	H 3
Cell size a, b, c (Å), α, β, γ (°)	106.38, 106.38, 91.619, 90, 90, 120
R / Rfree (%)	23.5 / 25

The binding sites of Mercury atom in the [U:HG2+:Mc] Metal-Mediated Dna Base Pair in A Self-Assembling Rhombohedral Lattice (pdb code 7sdx). This binding sites where shown within 5.0 Angstroms radius around Mercury atom.
In total only one binding site of Mercury was determined in the [U:HG2+:Mc] Metal-Mediated Dna Base Pair in A Self-Assembling Rhombohedral Lattice, PDB code: 7sdx:

Mercury binding site 1 out of 1 in the [U:HG2+:Mc] Metal-Mediated Dna Base Pair in A Self-Assembling Rhombohedral Lattice


Mono view


Stereo pair view

A full contact list of Mercury with other atoms in the Hg binding site number 1 of [U:HG2+:Mc] Metal-Mediated Dna Base Pair in A Self-Assembling Rhombohedral Lattice within 5.0Å range: probe atom residue distance (Å) B Occ B:Hg101 b:153.3 occ:0.45 N4 B:5CM4 2.2 202.8 1.0 C5A B:5CM4 2.7 384.6 1.0 C4 B:5CM4 3.3 208.2 1.0 N6 B:DA3 3.3 198.3 1.0 C5 B:5CM4 3.5 211.2 1.0 N7 B:DA3 3.6 205.7 1.0 O4 A:DU12 3.6 230.8 1.0 C6 B:DA3 3.8 203.0 1.0 O4 A:DT11 3.8 217.6 1.0 C5 B:DA3 3.9 206.3 1.0 N3 B:5CM4 4.5 210.7 1.0 C8 B:DA3 4.6 210.7 1.0 C4 A:DT11 4.6 221.7 1.0 N1 B:DA5 4.7 253.6 1.0 C4 A:DU12 4.8 230.5 1.0 C7 A:DT11 4.9 242.0 1.0 C6 B:5CM4 4.9 216.9 1.0 N1 B:DA3 4.9 205.1 1.0 N6 B:DA5 5.0 248.9 1.0

S.Vecchioni, B.Lu, R.Sha, Y.P.Ohayon, J.Yoder, K.Woloszyn, W.Bernfeld, W.Hendrickson, L.Rothschild, C.Mao, S.Wind, N.C.Seeman. Metal-Mediated Dna Nanotechnology in 3D: Reengineering the Semantomorphic Alphabet To Be Published.