Mercury in PDB 7se3: [Iu:HG2+:U] Metal-Mediated Dna Base Pair in A Self-Assembling Rhombohedral Lattice

The structure of [Iu:HG2+:U] Metal-Mediated Dna Base Pair in A Self-Assembling Rhombohedral Lattice, PDB code: 7se3 was solved by B.Lu, S.Vecchioni, N.C.Seeman, R.Sha, Y.P.Ohayon, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	32.82 / 3.76
Space group	H 3
Cell size a, b, c (Å), α, β, γ (°)	106.919, 106.919, 93.06, 90, 90, 120
R / Rfree (%)	18.3 / 18.7

The structure of [Iu:HG2+:U] Metal-Mediated Dna Base Pair in A Self-Assembling Rhombohedral Lattice also contains other interesting chemical elements:

Iodine

(I)

1 atom

The binding sites of Mercury atom in the [Iu:HG2+:U] Metal-Mediated Dna Base Pair in A Self-Assembling Rhombohedral Lattice (pdb code 7se3). This binding sites where shown within 5.0 Angstroms radius around Mercury atom.
In total only one binding site of Mercury was determined in the [Iu:HG2+:U] Metal-Mediated Dna Base Pair in A Self-Assembling Rhombohedral Lattice, PDB code: 7se3:

Mercury binding site 1 out of 1 in the [Iu:HG2+:U] Metal-Mediated Dna Base Pair in A Self-Assembling Rhombohedral Lattice


Mono view


Stereo pair view

A full contact list of Mercury with other atoms in the Hg binding site number 1 of [Iu:HG2+:U] Metal-Mediated Dna Base Pair in A Self-Assembling Rhombohedral Lattice within 5.0Å range: probe atom residue distance (Å) B Occ B:Hg101 b:256.4 occ:0.50 N3 B:DU4 2.1 238.6 1.0 N3 A:5IU12 2.1 305.0 1.0 O4 A:5IU12 2.1 304.1 1.0 C4 A:5IU12 2.4 300.5 1.0 C4 B:DU4 3.1 226.4 1.0 C2 B:DU4 3.1 248.2 1.0 O4 B:DU4 3.2 213.8 1.0 O2 B:DU4 3.2 254.2 1.0 N1 B:DA5 3.3 289.2 1.0 C2 A:5IU12 3.3 300.2 1.0 C2 B:DA5 3.4 291.8 1.0 O2 A:5IU12 3.8 304.6 1.0 C5 A:5IU12 3.8 291.7 1.0 N3 A:DT13 3.9 246.1 1.0 C6 B:DA5 4.0 290.0 1.0 N1 B:DA3 4.0 254.2 1.0 N6 B:DA3 4.0 227.6 1.0 C6 B:DA3 4.1 242.0 1.0 O4 A:DT13 4.1 237.8 1.0 N3 B:DA5 4.1 291.9 1.0 C4 A:DT13 4.1 238.8 1.0 N1 A:5IU12 4.4 290.6 1.0 C5 B:DU4 4.5 227.4 1.0 N6 B:DA5 4.5 282.3 1.0 N1 B:DU4 4.5 248.2 1.0 C2 A:DT13 4.5 248.7 1.0 C6 A:5IU12 4.6 287.2 1.0 C4 B:DA5 4.6 293.8 1.0 C5 B:DA5 4.6 294.2 1.0 C2 B:DA3 4.7 264.9 1.0 O4 A:DT11 4.8 280.5 1.0 N3 A:DT11 4.9 277.3 1.0 O2 A:DT13 4.9 256.1 1.0 C5 B:DA3 5.0 243.0 1.0 C5 A:DT13 5.0 231.9 1.0

S.Vecchioni, B.Lu, R.Sha, Y.P.Ohayon, J.Yoder, K.Woloszyn, W.Bernfeld, W.Hendrickson, L.Rothschild, C.Mao, S.Wind, N.C.Seeman. Metal-Mediated Dna Nanotechnology in 3D: Reengineering the Semantomorphic Alphabet To Be Published.