Mercury in PDB 7se5: [Iu:HG2+:Iu] Metal-Mediated Dna Base Pair in A Self-Assembling Rhombohedral Lattice

The structure of [Iu:HG2+:Iu] Metal-Mediated Dna Base Pair in A Self-Assembling Rhombohedral Lattice, PDB code: 7se5 was solved by B.Lu, S.Vecchioni, N.C.Seeman, R.Sha, Y.P.Ohayon, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	32.39 / 4.05
Space group	H 3
Cell size a, b, c (Å), α, β, γ (°)	106.454, 106.454, 87.813, 90, 90, 120
R / Rfree (%)	20.2 / 24.8

The structure of [Iu:HG2+:Iu] Metal-Mediated Dna Base Pair in A Self-Assembling Rhombohedral Lattice also contains other interesting chemical elements:

Iodine

(I)

2 atoms

The binding sites of Mercury atom in the [Iu:HG2+:Iu] Metal-Mediated Dna Base Pair in A Self-Assembling Rhombohedral Lattice (pdb code 7se5). This binding sites where shown within 5.0 Angstroms radius around Mercury atom.
In total only one binding site of Mercury was determined in the [Iu:HG2+:Iu] Metal-Mediated Dna Base Pair in A Self-Assembling Rhombohedral Lattice, PDB code: 7se5:

Mercury binding site 1 out of 1 in the [Iu:HG2+:Iu] Metal-Mediated Dna Base Pair in A Self-Assembling Rhombohedral Lattice


Mono view


Stereo pair view

A full contact list of Mercury with other atoms in the Hg binding site number 1 of [Iu:HG2+:Iu] Metal-Mediated Dna Base Pair in A Self-Assembling Rhombohedral Lattice within 5.0Å range: probe atom residue distance (Å) B Occ B:Hg101 b:118.8 occ:0.32 N3 B:5IU4 2.1 257.4 1.0 N3 A:5IU12 2.1 234.5 1.0 O4 A:5IU12 2.4 231.8 1.0 C4 A:5IU12 2.6 229.4 1.0 C2 B:5IU4 3.0 261.2 1.0 C4 B:5IU4 3.0 252.6 1.0 O2 B:5IU4 3.0 263.3 1.0 O4 B:5IU4 3.2 243.8 1.0 C2 A:5IU12 3.3 232.1 1.0 N1 B:DA3 3.4 190.3 1.0 N1 B:DA5 3.5 217.3 1.0 C2 B:DA5 3.6 218.8 1.0 O2 A:5IU12 3.6 236.8 1.0 N3 A:DT13 3.6 186.6 1.0 C6 B:DA3 3.7 188.2 1.0 C6 B:DA5 3.7 216.9 1.0 N6 B:DA3 3.8 178.2 1.0 C4 A:DT13 3.9 178.8 1.0 C5 A:5IU12 4.0 221.5 1.0 O4 A:DT13 4.0 176.8 1.0 N3 B:DA5 4.0 206.4 1.0 C2 B:DA3 4.0 196.3 1.0 C5 B:DA5 4.1 217.4 1.0 C4 B:DA5 4.2 212.2 1.0 C2 A:DT13 4.3 189.6 1.0 N1 B:5IU4 4.3 259.2 1.0 C5 B:5IU4 4.3 255.3 1.0 N6 B:DA5 4.3 220.4 1.0 N1 A:5IU12 4.4 224.2 1.0 O2 A:DT13 4.5 196.7 1.0 C5 B:DA3 4.7 194.6 1.0 C6 A:5IU12 4.7 219.1 1.0 C6 B:5IU4 4.8 255.3 1.0 C5 A:DT13 4.8 173.1 1.0 N3 B:DA3 4.9 201.2 1.0

S.Vecchioni, B.Lu, R.Sha, Y.P.Ohayon, J.Yoder, K.Woloszyn, W.Bernfeld, W.Hendrickson, L.Rothschild, C.Mao, S.Wind, N.C.Seeman. Metal-Mediated Dna Nanotechnology in 3D: Reengineering the Semantomorphic Alphabet To Be Published.